| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0541 |
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| Symbol | |
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| ID | 5660941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 663351 |
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| End bp | 666575 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641235086 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001500404 |
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| Protein GI | 157960370 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.865334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAAA AACTCATAGA CGTTGCCATT CGCAACCGTC TTTTGGTGAT CTTGGCACTT
ATCGGAGCCA TTATCGCCAG TGCAGCCATG CTGCCAAAAT TAAACTTAGA TGCCTTTCCT
GATGTAACTA ACGTACAGGT AACGGTAAAT ACCGCCGCCG AAGGCTTAGC GGCAGAAGAA
GTTGAGAAGC TAATCAGTTA CCCAGTTGAG TCGGCGATGT ATGCCTTACC AGCGGTAACC
GAGGTGCGCT CACTGTCGCG TACCGGTTTG TCGATTGTGA CTGTGGTATT TGCTGAAGGT
ACGGATATTT ATTTCGCACG TCAGCAGGTA TTTGAACAGT TGCAGGCTGC GCGCGAGATG
ATCCCCGATG GGGTGGGGGT GCCTGAAATT GGTCCGAATA CTTCGGGACT GGGTCAGATC
TATCAATATA TTCTGCGTGC AACACCTGAG TCGGGTGTTA ATGCAGCCGA GCTGCGTAGC
ATCAACGACT ACATGGTAAA ACTTATCATG ATGCCTGTGG GCGGCGTGAC TGAGGTGTTA
TCTTTTGGTG GTGAAGTTCG TCAGTACCAG GTGCAAATTG AGCCAAATAA ACTACTGAGT
TACGGCCTAT CTATGGCGCA GGTAACTAGC GCGTTAGAGA GCAATAACCG CAACGCCGGT
GGTTGGTTTA TGGACCAGGG CCAAGAGCAG CTCGTGGTGC GTGGCTATGG TATGTTGCCA
TCGGGCGATG CAGGCCTAAA GGCTATCGCG CAAATTCCAC TGACTGAGGT TGCCGGTACG
CCAGTGCGTG TGGGTGATAT CGCTAAGGTG GATTACGGCA GCGAAATTCG CGTTGGTGCC
GTGACCATGA CGCGCCGTGA TGAGGCGGGT AATGCCCAAG ACCTAGGTGA AGTCGTCGCT
GGCGTAGTAC TTAAGCGCAT GGGCGCCAAC ACCAAAGAAA CCATCGATGA TATCAGTGCT
CGCACGGCGA TGATTGAACA GGCGCTACCC GACGGTGTGT CGTTTGAAGT CTTCTATGAC
CAATCAGACC TTGTGAACCA AGCAGTAACG ACGGTACGTG ACGCCCTATT GATGGCATTC
GTGTTTATCG TAGTTATCTT AGCTCTGTTC CTAGTCAACA TCCGCGCGAC CATGTTGGTG
CTGCTGTCTA TTCCGGTTTC TATCGGCCTT GCGCTGCTTG TGATGTCTTA CTTTGGCATG
TCGGCTAACT TGATGTCCTT AGGTGGTTTA GCCGTGGCTA TCGGTATGTT GGTAGATGGC
TCGGTGGTGA TGGTGGAGAA CATCTTTAAA CACCTGACTC AGCCTGACAG ACGTCATCTA
GCTAATGCTC AAAAGCGTGC CTCTGGCGAA GACGATCCTT ACCACGCCGA TGAAGATGGT
ACTTCGACGG CTTCGCATGA TGAGTCGAGT GCGGGTATTG CCATGCGCAT CATGCTGGCA
GCAAAAGAGG TGTGTAGTCC AATCTTCTTT GCAACCGCAA TCATCATAGT GGTTTTCGCG
CCGTTGTTTG CGCTAGAAGG GGTTGAAGGC AAGCTATTCC AGCCGATGGC GGTGAGTATT
ATCTTGGCGA TGATCTCAGC CTTGCTGGTG GCCTTGATCG CGGTTCCAGC GCTTGCGGTG
TACCTGTTTA AGCGTGGTGT GGTACTGAGA GAAAGTGCCG TACTTAAGCC GATTGAATCG
GTTTACCGTA AGCTTCTAAG CTCAACCATG GCGCATCCTA AAGTGGTTGG GATCACGGCC
GTTGTGATGT TTGCAATGAG CATGATGCTG CTACCAAGGC TGGGTACCGA GTTTGTACCT
GAGCTGGAAG AGGGCACCAT CAACCTACGT GTGACTCTTG CGCCAACCGC AAGTCTTGCG
ACCTCTTTAG ATGTTGCGCC TAAGCTTGAG GCCTTGCTGC TTGATTTCCC TGAAGTGGAT
TATGCCCTTA GCCGTATCGG CGCCGCCGAG TTGGGTGGCG ATCCCGAGCC GGTGAACAAC
ATAGAGATCT ACATCGGCCT TAAGCCTGTC GATGAGTGGG TTAGTGCGAG CAATCGCTTC
GAGTTACAGC GTAAGATGGA GGAGAAACTT AACGTCTATC CTGGTCTGTT GTTTACCTTC
TCTCAGCCAA TTGCGACTCG CGTCGATGAG TTGTTATCGG GTGTGAAGGC TCAGCTTGCG
ATTAAGATCT TTGGCCCAGA CTTAGATGTA TTGTCTGAAC GCGGTCAGGT GCTAACAGAG
TTAGTATCAC AAATTCCGGG TGCGGTGGAT GTGTCATTGG AGCAGGTTAG TGGTGAGGCT
CAGCTAGTGG TTCGCCCTAA GCGTGATCAG TTAGCGCGTT ATGGCATCAG TGTCGATGAG
ATCATGGCAC TAGTGAGCCA AGGTGTGGGT GGCGCGAGTG CGGGGCAGGT GATCGACGGT
AACGCTCGAT ACGACATCTA TGTTCGTTTA GCCGAGCAGT ATCGTAGCTC GCCAGATATC
TTGGAAGATC TACTGTTAAC GGGCGTAAGT GGTGCAACCG TACGTCTTGG TGAAGTGGCC
GATGTAGTCA TCGAGATGGC GCCGCCTAAC ATTCGTCGTG ACGATGTGCA GCGTCGTGTG
GTGGTACAGG CTAACGTTGC CGATCGTGAC ATGGGCTCAG TGGTAAATGA TATCTACGCT
ATCGTGCCAC AGGCGGAACT GCCACCGGGT TATACCGTTG TGGTGGGTGG CCAGTATGAG
AACCAGCAGC GTGCACAGCA GAAGTTGATG CTAGTGGTAC CTGTCTCTAT CGCCTTGATT
GCCTTGCTAC TGTACTTCTC TTTTGGTTCG GTAAAGCAGG TCGGCCTGAT TATGGCTAAC
GTACCTTTAG CTCTAATTGG CGGTGTTGTT GCGCTGTTTG CCAGTGGCAC ATATCTGTCG
GTACCTAGTT CAATTGGCTT TATCACATTA TTTGGTGTGG CAGTGCTCAA CGGGGTGGTG
TTGGTGGACT CGATTAACCA GCGCCGATCT AGCGTCAAAG AGGAGACAGA TGAGTCCCTC
TATGATGCCG TTTATGAAGG TACAGTAGGG CGTCTGCGTC CGGTACTGAT GACGGCACTG
ACCTCGGCTC TGGGCTTGAT CCCTATTCTG CTTTCTTCGG GAGTCGGTAG TGAGATCCAG
CAGCCATTAG CCGTGGTGAT CATCGGTGGT CTGTTTAGTT CGACCGCACT GACCTTACTG
GTATTGCCAA CGCTTTATCG TTGGATCTAC CAAGGCCGTA AGTAA
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| Protein sequence | MLQKLIDVAI RNRLLVILAL IGAIIASAAM LPKLNLDAFP DVTNVQVTVN TAAEGLAAEE
VEKLISYPVE SAMYALPAVT EVRSLSRTGL SIVTVVFAEG TDIYFARQQV FEQLQAAREM
IPDGVGVPEI GPNTSGLGQI YQYILRATPE SGVNAAELRS INDYMVKLIM MPVGGVTEVL
SFGGEVRQYQ VQIEPNKLLS YGLSMAQVTS ALESNNRNAG GWFMDQGQEQ LVVRGYGMLP
SGDAGLKAIA QIPLTEVAGT PVRVGDIAKV DYGSEIRVGA VTMTRRDEAG NAQDLGEVVA
GVVLKRMGAN TKETIDDISA RTAMIEQALP DGVSFEVFYD QSDLVNQAVT TVRDALLMAF
VFIVVILALF LVNIRATMLV LLSIPVSIGL ALLVMSYFGM SANLMSLGGL AVAIGMLVDG
SVVMVENIFK HLTQPDRRHL ANAQKRASGE DDPYHADEDG TSTASHDESS AGIAMRIMLA
AKEVCSPIFF ATAIIIVVFA PLFALEGVEG KLFQPMAVSI ILAMISALLV ALIAVPALAV
YLFKRGVVLR ESAVLKPIES VYRKLLSSTM AHPKVVGITA VVMFAMSMML LPRLGTEFVP
ELEEGTINLR VTLAPTASLA TSLDVAPKLE ALLLDFPEVD YALSRIGAAE LGGDPEPVNN
IEIYIGLKPV DEWVSASNRF ELQRKMEEKL NVYPGLLFTF SQPIATRVDE LLSGVKAQLA
IKIFGPDLDV LSERGQVLTE LVSQIPGAVD VSLEQVSGEA QLVVRPKRDQ LARYGISVDE
IMALVSQGVG GASAGQVIDG NARYDIYVRL AEQYRSSPDI LEDLLLTGVS GATVRLGEVA
DVVIEMAPPN IRRDDVQRRV VVQANVADRD MGSVVNDIYA IVPQAELPPG YTVVVGGQYE
NQQRAQQKLM LVVPVSIALI ALLLYFSFGS VKQVGLIMAN VPLALIGGVV ALFASGTYLS
VPSSIGFITL FGVAVLNGVV LVDSINQRRS SVKEETDESL YDAVYEGTVG RLRPVLMTAL
TSALGLIPIL LSSGVGSEIQ QPLAVVIIGG LFSSTALTLL VLPTLYRWIY QGRK
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