Gene Spea_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0530 
Symbol 
ID5660930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp655536 
End bp656162 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content44% 
IMG OID641235075 
Producthypothetical protein 
Protein accessionYP_001500393 
Protein GI157960359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000790995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGG CTAACCTTTA TTATGTTTAC GATCCTATGT GTAGCTGGTG CTGGGGTTAT 
AGGCCGACTT GGTTAGCGCT ACAGTCAAAG CTACAAATTA CTTATCCAGA ACTTAATATT 
GAATATCGCT TGGGGGGCTT GGCGCCCGAC AGTGATGAAC CTATGCCCGA TGACATGCAA 
CACTTTTTGC AACGAACATG GCTGCAGATT GCCGAGCAGT TAGACACACA ATTTAATTTC 
GACTTTTGGC AAAACTGTCA ACCTCGTCGC TCAACTTACC CCGCCTGCCG CGCTGCGCTG 
TTAGCTAGAG ATGTAGGTCT TGAGCAAGAG ATGATCTTAG CGATTCAGCA GGCCTATTAC 
CTGGAGGCGA AGAACCCGTC AGATACCGAA ATCTTAGTTA CACTGGCTGG TGAGCTAGGT 
CTAGATGAGA CGTTATTTAC AAAGGCATTA TTGAGTGAAA CGACCAAGGT TAAATTAGAT 
GAGGAAGTCA GTCGCAGTCG GCATTTGCCT ATTGAGGGCT TTCCTTCATT AGTCTTGTTA 
GTAAACGGAG AGTTTTTTCT TATCGAGCTT GATTATCAAA ATTGGCAGAC CAGTTATAAA 
CAGATTAGAG CGTTACTGAC AGATTAG
 
Protein sequence
MNLANLYYVY DPMCSWCWGY RPTWLALQSK LQITYPELNI EYRLGGLAPD SDEPMPDDMQ 
HFLQRTWLQI AEQLDTQFNF DFWQNCQPRR STYPACRAAL LARDVGLEQE MILAIQQAYY 
LEAKNPSDTE ILVTLAGELG LDETLFTKAL LSETTKVKLD EEVSRSRHLP IEGFPSLVLL 
VNGEFFLIEL DYQNWQTSYK QIRALLTD