Gene Spea_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0519 
Symbol 
ID5660919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp633517 
End bp634521 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content51% 
IMG OID641235057 
ProductLacI family transcription regulator 
Protein accessionYP_001500382 
Protein GI157960348 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCA TGAAAGATGT CGCCAAACTT GCCAGCGTAT CCACATCGAC AGTGAGTCAT 
GTGATGAATG GTACTCGCTT TGTAAGTGAT GATATTGCTA AGCGCGTGCA AGATGCCGCG
CAGCAGTTAA ATTATCATGG CCCTTCAGCG GTGGCTCGTA GCCTTAAACA GAATTGCACT
AAAACCATCG GCATGTTGGT AACCACCTCG ACCAACCCAT TCTATGCTGA GGTGGTGCGC
AGTGTTGAGC AAGCCTGTTA TCAGCAAGGC TATAACCTTA TTTTGTGTAA TACCGAGGGT
GATGCCCAAC GCTTAAAGCG CTCATTAACT ACCTTGATTG AGCGACGCGT CGACGGTTTA
ATTATGATGT GCGCCATGTT AGAAGGTGAC GATGCGCTGA TCTATCGCCG CTTAGGTGGC
TTACCTGTCG TGGTGATGGA TTGGGGCCAA GTTGACTTTC CTTGCGACAA GATTCAGGGC
CACTCGCGCC AAGGTGGCAT ACTGGCGACG CAATACCTGA TTGATAACGG CCATACGCAA
ATCGGCTGTA TTACCGGCCC GCGTAATCGC CAACAGGCTG ACTTGCGTTA CCAAGGTTTT
GTCGATGCCA TGGCGGCGGC TAATTTACCG ATAAATCCGG ATTGGGTCAT TGAAGGTAAC
TTTGAAACCG AAGGCGGCAA GGCGGCGTTT GCTAAGCTGC AAGTCGCGGG CAAATTACCG
AGTGCGCTAT TTGTGTGTAA CGACATGATG GCTATTGGCG TACTGCATGA AGCACAGCGC
AGCGGCGTGC AGATCCCTGA GCAGTTATCG GTAATTGGTT ACGACAACAT TCAGCTGGCT
AAGTTTATGA CTCCGGCGCT AACCAGTATT CATCAGTCTA AAGCGCGCTT AGGCGCAGCA
GCGGTCAATG CCTTGATTGC ACGCCTGCAT GATCCAAGCC TGCCTCCGCA GTTTATGGAT
ATTGAGCCAC GAGTGACCGA ACGCGCCAGT GTGAAAAAAA GCTAA
 
Protein sequence
MATMKDVAKL ASVSTSTVSH VMNGTRFVSD DIAKRVQDAA QQLNYHGPSA VARSLKQNCT 
KTIGMLVTTS TNPFYAEVVR SVEQACYQQG YNLILCNTEG DAQRLKRSLT TLIERRVDGL
IMMCAMLEGD DALIYRRLGG LPVVVMDWGQ VDFPCDKIQG HSRQGGILAT QYLIDNGHTQ
IGCITGPRNR QQADLRYQGF VDAMAAANLP INPDWVIEGN FETEGGKAAF AKLQVAGKLP
SALFVCNDMM AIGVLHEAQR SGVQIPEQLS VIGYDNIQLA KFMTPALTSI HQSKARLGAA
AVNALIARLH DPSLPPQFMD IEPRVTERAS VKKS