| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0517 |
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| Symbol | |
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| ID | 5660917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 631445 |
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| End bp | 632344 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235055 |
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| Product | D-ribose transporter subunit RbsB |
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| Protein accession | YP_001500380 |
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| Protein GI | 157960346 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAC TTGCCCATCA CAAAGTGTCA GTTCTCTTGT CTGCAGCCTT GCTGTCGGTT
AGCACGTCTT TCAGCGCCAG CGCGCAAGAT GCGATAGCTA TCGTGCTATC GACGATGAAC
AACCCGTTTT TTGTCACCAT GAAAGATGGC GCCGAGGCTA AAGCGGCAGA GCTTGGCTAC
AAGCTAATAG CGCTGGACTC GCAAAACGAT CCCAGCAAAG AGCTGGCAAA TGTTGAAGAT
CTCACCATGC GCGGCGTTAA GGCGATTTTG ATTAATCCAA CCGATGCATT AGCGGTAACC
AATGCGATTC GCACCGCTAA TCGTGCCAAC ATTCCGGTAC TGACATTAGA TAGAACCGCA
GCACATGGCG ATATCGTCAG CCATATTGCA TCCGACAATA TCGCTGGTGG AGAACTTGCT
GGGGAGTTTA TTGCACAGCA ACTAGGCAAG AACGCTAAAG TTATTCAGCT TGAGGGCATA
GCCGGTACAT CGGCCGCCCG TGAGCGCGGT GAAGGTTTTA GTAACGCAGT GACGGCCAAT
AACTTTGAGT TGTTATCTAG CCAGCCTGCG GATTTTGACC GCTCAAAAGG CTTAAACGTG
ATGGAAAATA TGCTGGCAGC CAATGGCGAT GTGCAGGCGG TATTTGCCCA GAATGATGAG
ATGGCGTTAG GCGCACTGCG CGCAATTGAG GCGGCGGGTA AAGATATTCT GGTGATTGGC
TTTGATGGCA CCGATGAAGG TATTGCGGCG GTTAGACGTC AGCAACTGTC GGCAACGGTT
GCTCAGCAAC CTGAGCTATT AGGTGCGACG GCGATTATGA CAGCAGATAG AATTTTAAAA
GGCCAAGTCG TTGAAAAATC TATCCCTGTT GCGTTAAAAA TCATTACTCA AACACAGTAA
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| Protein sequence | MKRLAHHKVS VLLSAALLSV STSFSASAQD AIAIVLSTMN NPFFVTMKDG AEAKAAELGY
KLIALDSQND PSKELANVED LTMRGVKAIL INPTDALAVT NAIRTANRAN IPVLTLDRTA
AHGDIVSHIA SDNIAGGELA GEFIAQQLGK NAKVIQLEGI AGTSAARERG EGFSNAVTAN
NFELLSSQPA DFDRSKGLNV MENMLAANGD VQAVFAQNDE MALGALRAIE AAGKDILVIG
FDGTDEGIAA VRRQQLSATV AQQPELLGAT AIMTADRILK GQVVEKSIPV ALKIITQTQ
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