| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0515 |
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| Symbol | |
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| ID | 5660915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 628882 |
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| End bp | 630387 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235053 |
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| Product | D-ribose transporter ATP binding protein |
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| Protein accession | YP_001500378 |
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| Protein GI | 157960344 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CCATATTGCA GTTACAAGCC ATTGAAAAGT CTTTCCCTGG GGTTAAAGCC
CTAGATAAAG CCTGCTTAAA TGTTTACCCG GGCCAAGTGA TGGCGCTGAT GGGGGAGAAC
GGTGCTGGTA AGTCGACCCT GATGAAAGTG CTAACCGGGA TCTACTCATT AGATGCTGGC
AGCATTCGCT ATCAAGGTGA AAGCCGAACT TTCAACGGCC CCCGCGATTC ACAAGCCGCA
GGCATAAGCA TTATCCACCA AGAGCTCAAT CTGCTACCTG AGCTGACCAT AGCCGAAAAC
ATCTTTCTCG GACGTGAGAT AACCTCGCGG TTTGGACGTA TCTTATGGGA TGAGATCAAC
GCTCAGGCGA CGGCATTACT TACACGTTTG GGCATTTCAC ACTCTCCGCA AACACTTGTT
GGCAGCCTAA GTTTGGGCGA GCAGCAGATG GTGGAGATAG CTAAAGCCAT CTCGTTCGAC
TCGAAAGTTA TCATCATGGA TGAGCCGACC GATGCGCTTA CCGATGTAGA GACGCAAGCG
CTGTTTAAGG TGATTAACGA ACTGCGCGAC CAAGGCTGCG GCATCGTTTA TATCTCGCAC
CGTATGCAAG AGATCTTTAC CATTTGTGAC GCGGTGACTG TGCTGCGTGA CGGTGGCTTT
ATCGACGAAT CTGCTATCGC AGAGATCACT GAAGATCAGC TGATTGAGCG TATGGTAGGC
CGCAAACTGG CAGACCAATA TCCACGTATC GCTATCACCC ACCAAGGTTG CCGCTTAGCG
GTTAACAATC TATCTGGCCT TGGCGTTGAA AACGTCAGCT TTGAGCTCAA TCGAGGCGAG
ATCTTAGGTT TCTCAGGCCT GATGGGCGCT GGTCGCACCG AGCTGATGAA GCTCATCTTT
GGTGCGGCGG CAAAAACTCA GGGTGAAGTG AGTCTTAACG GTGAGCTTAC CGCGATTAAT
AGCCCGCAAC AGGCATTAGC TGCAGGCATT GCCTACATCT CTGAAGACCG CAAGGGTGAC
GGCTTACTGC TGGACTTGTC GGTGAAAGAA AACATGTCTA TCTGTGCGCT ATCAAAACTC
AGTCGTGGCG TACAGTTACG CCATCAAGAT GAAATTGCCG AGGTCGATCA GTTTATTGGC
GCGTTTAATA TCAAGACCCC AAATCGAGAT GCGCGCATTG GTAACTTATC GGGTGGTAAT
CAGCAGAAGG TAGCGATTGC TAAAGGGTTA ATGATTGCGC CGCAGGTACT GATTTTAGAT
GAGCCGACCC GTGGCGTAGA TGTTGGCGCG AAAAAAGAGA TCTACGATCT TATCAATCGA
TTCAAAGCCG ACGGTATGAG CATCATTTTA GTGTCATCGG ATATGCCTGA GCTGTTAGGT
ATGTCAGACC GTATTTTAGT TATGCATCAG GGCCAGATCA GTGGCGAATT TGATGCAAGC
CAAGCAGATC AAGAAGCGAT TCTTGCCTGC GCCGTGGGTA AAACTTCCAA CAAGGATATT
GCATGA
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| Protein sequence | MTQAILQLQA IEKSFPGVKA LDKACLNVYP GQVMALMGEN GAGKSTLMKV LTGIYSLDAG
SIRYQGESRT FNGPRDSQAA GISIIHQELN LLPELTIAEN IFLGREITSR FGRILWDEIN
AQATALLTRL GISHSPQTLV GSLSLGEQQM VEIAKAISFD SKVIIMDEPT DALTDVETQA
LFKVINELRD QGCGIVYISH RMQEIFTICD AVTVLRDGGF IDESAIAEIT EDQLIERMVG
RKLADQYPRI AITHQGCRLA VNNLSGLGVE NVSFELNRGE ILGFSGLMGA GRTELMKLIF
GAAAKTQGEV SLNGELTAIN SPQQALAAGI AYISEDRKGD GLLLDLSVKE NMSICALSKL
SRGVQLRHQD EIAEVDQFIG AFNIKTPNRD ARIGNLSGGN QQKVAIAKGL MIAPQVLILD
EPTRGVDVGA KKEIYDLINR FKADGMSIIL VSSDMPELLG MSDRILVMHQ GQISGEFDAS
QADQEAILAC AVGKTSNKDI A
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