Gene Spea_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0493 
Symbol 
ID5660893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp604262 
End bp604921 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content35% 
IMG OID641235031 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001500356 
Protein GI157960322 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAA GCTTGATAGG AATTTTTGCT ACTGTTGCCT TTGCTCATTT TTTAGCATTA 
ATTAGCCCAG GGCCTGATTT TGTTATCCTT GTAAAGAGTG CCGTTAAAAA TGAAAGCAAA 
AAAGCCATAG GAGTCGCACT GGGCATATCA ATTGCTAATG CATTATATAT AGCATTATGC 
TTAATTGGCG TGGGTTCATT ATTAGCGAGT TCTGTATATA TTATGGTAGG GCTAAAAATT 
GCAGGAGGGT TGTTTTTAAT ATATTTAGCA ATTCAAGCCT TACGTGCAAA AAAAAGCGAT 
TACGCTGGTT TGTCTTCTCA AGTAAATCGG GGGGCTCATA ATGAGACCAC TTTATTCAAG 
GAGTTTATTA TTGGTTTTAT GTCTGCAATT TTAAACCCAA AAAATATTCT ATTTTATTTA 
AGCTTATTTA CGGTTGTGTT AACTAAAGAC GTAAGCCTTA CATTTAAAAT CATGCTGGGA 
ATTTGGATGA CTTCCATAGT GTTTATTTGG GATTCAGCAA TTGTAATTTT TTTGTCTGGC 
GATAAAGTCA GGAGTAAATT TTCTAAGCTG GCTTATTACA TTGATAAAGT AACAGGTGCG 
ATTTTAGGCT TAGTCGGCTT TACAATCGTG AAGGCCGCGT TTACCAAATC AAACGTATAA
 
Protein sequence
MDISLIGIFA TVAFAHFLAL ISPGPDFVIL VKSAVKNESK KAIGVALGIS IANALYIALC 
LIGVGSLLAS SVYIMVGLKI AGGLFLIYLA IQALRAKKSD YAGLSSQVNR GAHNETTLFK 
EFIIGFMSAI LNPKNILFYL SLFTVVLTKD VSLTFKIMLG IWMTSIVFIW DSAIVIFLSG 
DKVRSKFSKL AYYIDKVTGA ILGLVGFTIV KAAFTKSNV