| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0489 |
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| Symbol | |
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| ID | 5660889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 600202 |
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| End bp | 601485 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235027 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001500352 |
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| Protein GI | 157960318 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAA TCACTCCTTA TTTAGAGTTA GATACAGAAG CTAACCAGTT AGTCGATCAT
GTGAGTGGTA AAAAGGTTAG TCTGACCTTC TCTGAGTCTG CAGTACTACA TCGCCTTTTG
CTTTCTGCAA ACCCCGTTTG TTCAAAAGAA GAGTTACTCA GCGCGGGTTG GCCAGACCGC
GTGGTTGCCG TGACATCTTT AACCCAATGT ATAAGTACCC TGCGTAAAAA GCTTGATGGC
TATCGTGAGG TGCAGCTAAA GACGATTGCT CGTCGCGGTT ATCAGCTACA TATTTCGACT
CAATCCCATG TGAAAATGTT GGCAGTAAAT GACGCCGAAT CGATGCGCGC CGCGATTGTC
GATGTGTCCT TGTTAGTCAA GATTTCAGGC ATTGTTATTG CTTTACTACT ACTGATACTT
GCTTGGTATT TCAGTGATTA CCATAAGATT AAGCAAAACC TATCCCGCTG GAGTGCCGAC
GAGCAATTTG AGCTGAAGGT TGGCGGCCTA AAGGGCGATA CCCAGCTGTT GTATAAAGAT
AATGCCCCCC ATTTACATCC GTTTATGTGG GAAAAACACC TTGAGCCAGA CGATAACTTT
ATGACCTGTC ATAAAGGTTT TAATGCATTC GCAGCCACCG ATGGTGACAA TTATTCAATG
GCAATATGCC CAGGTACCGA TGCTAAGCAA TGTGCTGGTA AAGGCTTAAT TAACATTACT
TCGGTTGATT CAGAGCCAGC GTCTCTCAAT ATGCCTGAAT TTGTTGAGCT GTCGACCGCG
ATGGAGCAAC GCATCCGTTA CAATCGAGTG ATGCTACCTG AAAGTACCGA TACTAGTGGT
GCTTTCTTAG AGCATAACTA TCAAGCAGAT GTGTATTTTC CGGTTAAAGG TGAGCTGCTT
ATTCGCGCCG ATATCAATAT GTCGCTGATC TATGACTCAG CAGATACTGG CGAGTTTTAC
TCATCGACCT GCATTACCGA CCAAGACTGT TTGACTACGC CGATTAAGTA CAAGGTACGT
GGTAAGTTTA AGCAGTATTC AGGCAAGATA GATGAGCTAA ATGTGGATGT GTTCCAGGTT
AAAGTCGAAC AAAAAGACTT AATTAAACCG GAGACATTGA ATGACTCAGC GGTGCGTTTT
TATCGCGATT TACGTAAGCG TGATATTAAA GATGAAGAGT TGTATTTTAT TCGAGTTCAC
CAGGATCATA AGACTGCGGT TTGGACCATT CCGCTGTTTG GCCAAGTTAC GGCTTGGTAC
CATTATGAGA GATTCGATAT TTAG
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| Protein sequence | MLKITPYLEL DTEANQLVDH VSGKKVSLTF SESAVLHRLL LSANPVCSKE ELLSAGWPDR
VVAVTSLTQC ISTLRKKLDG YREVQLKTIA RRGYQLHIST QSHVKMLAVN DAESMRAAIV
DVSLLVKISG IVIALLLLIL AWYFSDYHKI KQNLSRWSAD EQFELKVGGL KGDTQLLYKD
NAPHLHPFMW EKHLEPDDNF MTCHKGFNAF AATDGDNYSM AICPGTDAKQ CAGKGLINIT
SVDSEPASLN MPEFVELSTA MEQRIRYNRV MLPESTDTSG AFLEHNYQAD VYFPVKGELL
IRADINMSLI YDSADTGEFY SSTCITDQDC LTTPIKYKVR GKFKQYSGKI DELNVDVFQV
KVEQKDLIKP ETLNDSAVRF YRDLRKRDIK DEELYFIRVH QDHKTAVWTI PLFGQVTAWY
HYERFDI
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