| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0484 |
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| Symbol | |
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| ID | 5660884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 594974 |
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| End bp | 595921 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235022 |
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| Product | polysulphide reductase NrfD |
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| Protein accession | YP_001500347 |
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| Protein GI | 157960313 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.682806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGTA ATATTGAATT TACAATGGGC CTGTCACAAG GCATCGCTTG GCCTTGGCCG
ATTGCGGTTT ACCTGTTCTT TGCTGGTATC TCTGGTGGTG CATTAGCGGT TGCGCTGTTC
ATTCGTTTCT ACAAAAAACA AACTGAAAAC ACCCCTTTCT TAAAGGCGGC GTCTTTAGTT
TCTTTAGTGA CGATTGCACT GGGTATGTTG TGTCTAGTTA TCGACTTGAC TAACCCGCTG
TTCTTCTGGC GAATCTTGGT GTTCTACAAC CTAAACTCTG TAATGTCTGT GGGTGTTCTT
GTCCTAAATG CATACATTCC TTTGGTAGCG TTGGTGACAC TGTTCGCGTT TGAAGAAGAG
ATTAAGGCAT GTAAGCCACT GCATTTCTTG TTGCCTGTTA TCGACAAGTT ACGCGTTATT
CGTGCGCCAT CTGAAAAGCT AGTACTGGTA CTTGCTATGT CAGTGTGTGC CTATACCGGC
TTCTTGATCT CAGCCTTGAT CCGTTTCCCA ATTATCAATA CCTCAGTATT GCCTGCGCTA
TTTGTTGCGT CAGGTCTTTC TGCCGGTGCT GCCGCTGCAA AAATGGTTGC AGTATCAGTA
TTTAAAGAAG ACCTACACAG CAAAGACATG CACACATTAC ATGCCATTGA GTGGCCAGTA
ATGGCTGCCG AAGCTCTGTT CTTATTCATG ATCATCATGT CTCTAGCAAC AGGTAATGCA
GGCGCACAAA GTGCATTCGC AGCTTTCCAT AGCGGCGTAT GGGCAAATGT GTTCTGGATT
GGTGTAGTGG GTACCGGTTT TGTTGGTCCA CTACTGCTTA ACTTCGCCAC AGGTAAAGCC
TTCAGCCATT CGGCTAAAGC GTTTTTCATG TCAGGCATGT GTGCGGTTGT TGGCATGATG
TGCCTGCGTT TATTCATCAT TTACGCAGGC CAGTTAAATG CCATCTAG
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| Protein sequence | MDGNIEFTMG LSQGIAWPWP IAVYLFFAGI SGGALAVALF IRFYKKQTEN TPFLKAASLV
SLVTIALGML CLVIDLTNPL FFWRILVFYN LNSVMSVGVL VLNAYIPLVA LVTLFAFEEE
IKACKPLHFL LPVIDKLRVI RAPSEKLVLV LAMSVCAYTG FLISALIRFP IINTSVLPAL
FVASGLSAGA AAAKMVAVSV FKEDLHSKDM HTLHAIEWPV MAAEALFLFM IIMSLATGNA
GAQSAFAAFH SGVWANVFWI GVVGTGFVGP LLLNFATGKA FSHSAKAFFM SGMCAVVGMM
CLRLFIIYAG QLNAI
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