Gene Spea_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0479 
Symbol 
ID5660879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp590051 
End bp592087 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content46% 
IMG OID641235017 
Productcytochrome c, putative 
Protein accessionYP_001500342 
Protein GI157960308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTT GGAAACTTAA AGCAGTCGCG AGTGTACTGT TTTGTTTCGG CGCAATAGGT 
AACGCTAGTG CTGCTGGTGA TAAGTACAAT AGCATCCCAG AAATGGGTGC ATCTGCTAAG
AATGCAATTG CAAACTATGC TGGTACAGAA GAAAGAACAG GTGTTAAATC GCTACACGAT
TATATTGTTC AAGAAGATGA GTTGTTTGAT TTCTTATTTC AAAACCATCC AATGTTCAAA
TATCAAGAAG AAGGTAACTT AATTGGTGAT TACCATATTA GTGACCGTGG TGAAGAATAT
TTAGATACTG GCGGAAGCCA GGCATACAGT AAGCGTGTAG GTCGTCCAAG TGCAGTTCAG
TACCGTCTAG GTGCTAAATC AACGTTGGAT TTCCCAAACA ATTTCGTAGG TCCAGAGAAG
TGTGGTGAGT GTCACGCGAC TCAGTTTGAG AAATGGCAAC GTTCGCGCCA CGCAAACGTA
GTGCGTTTCC CAAGCGAAAT TACCGATAAA GAAGTACCAA ATGGCGATTT GAATGCAAAG
CTATACGGTA GTGATGCATC AATGCTTCCA GACGGTATTC GTGCTAACGA CGTGTACGCC
ATTATTGGTA CACCACGTAC TAAGTACGGT TTCCTAGATT CATGGTTGGT TCGTGGTACT
TACCACGTTC GTGACGGTTT GTTATCTGAA GGTACAGGCA AGATGGTTGC CGGTGCTAAC
CAGTTCTCTC GTGGTTGGGC TGAATGGCTA ACTCCAGAGA TGGCGAAGAA GATTAACAAA
GCAATTCCAG AGTTCCCAGT AACGCTAGAA GAGTTTGGCG CTACAGGTTC TCACCAGTGG
GGTATGACTT CATACGGTGC TAAGTACGAG AAAGAGATGC TTTTCCAACC TGGTAGCTCT
TACTGTGAAA TGTGCCACAC GTATAAGTTT GACTTCCAAA ACAAGCAAGA GTTCTTCGAT
GCACTTGGCG ACGCTAAGAA GCTACAAGAG CACACTATCT CTAAGGGTAT CTCTTGTGAA
GAGTGTCATG GCGCGGGCGG TCACTTAGAT GGCGGTACTG GCGGCATGCA GTCTAACTGT
GAACGTTGTC ACCAGCGTTT CTTCTTCGTT GATGCACTAG CTGATACAGA GCAAGCGCAA
GAGAAGATGG AATACGCATT TGGCGTATAC ATGAAGTCTG CTTGTCCATC TTGTGGTACT
GAAGGTTCAC AAATGTTTGC TTCTTCTCAT TACGAGAAAG GTATGCGTTG TACAACTTGT
CACGATCCAC ACGAAGTGAC TGATGGCGAC TTCCTATCAG GTTTCTCTAA GCCAATGCTG
AAGAAAGACT GTGTTGATTG TCACGAAGCG CAAGCGATGA TCGCTGACAA CACAGACACA
CACAGCAACC AAACGTGTCA AAGCTGTCAC ATGCCTAACA TGGGTAGCTG TGAAAACTTC
GCTGCGATTC AGTTCCCTGA TAGCGCAGGT TTCGACGCGG TACGTCGTTC ACACATGTGG
AAGATTGATA TCGACCCAGA GCGTAAGACA TTGAACCCTC CTGAAGGTCA ACCACGTGAT
TCAGGCGTGA AAGGCTGGAC TGTGGCTAAG AACGAAGAAG GTCATAACTA CTTAGACTTA
ATGTGGACTT GTGCTCGTAC AGCGATTTCT GACAAAGACG TAGTGGATAA CAAGGGTTGT
CACAGCCCAT TCCAGTCTGA GCTAGAAACT GGCCTACATT ACGACGACCA GCTAGAGATC
TACGGCGAAG TGATGAAGAT GCAAACGCCT GTTAAAGACG TTTACGCCAA AGTTGAACAA
GCTCTTGAGC GCATCGATAC GCTACTAGAA GTGACTAAGC TGTCTACTGC AGACAAGACT
GAAGTGCTAA TGCTAGCTGA GAAAGCGCAA GAAACTATCG ACCTAATCAA GAAAGATGGT
TCATGGGGTG TTCATGGCTT CCGTTACAGC CAGAAGCGTC TAGACGCAGC CCTAACTTAT
GTTACCCAAG CTCAGAACAT TCTAGACGGT GTTGGTTACA GCGCTAAAAA GATGTAA
 
Protein sequence
MKSWKLKAVA SVLFCFGAIG NASAAGDKYN SIPEMGASAK NAIANYAGTE ERTGVKSLHD 
YIVQEDELFD FLFQNHPMFK YQEEGNLIGD YHISDRGEEY LDTGGSQAYS KRVGRPSAVQ
YRLGAKSTLD FPNNFVGPEK CGECHATQFE KWQRSRHANV VRFPSEITDK EVPNGDLNAK
LYGSDASMLP DGIRANDVYA IIGTPRTKYG FLDSWLVRGT YHVRDGLLSE GTGKMVAGAN
QFSRGWAEWL TPEMAKKINK AIPEFPVTLE EFGATGSHQW GMTSYGAKYE KEMLFQPGSS
YCEMCHTYKF DFQNKQEFFD ALGDAKKLQE HTISKGISCE ECHGAGGHLD GGTGGMQSNC
ERCHQRFFFV DALADTEQAQ EKMEYAFGVY MKSACPSCGT EGSQMFASSH YEKGMRCTTC
HDPHEVTDGD FLSGFSKPML KKDCVDCHEA QAMIADNTDT HSNQTCQSCH MPNMGSCENF
AAIQFPDSAG FDAVRRSHMW KIDIDPERKT LNPPEGQPRD SGVKGWTVAK NEEGHNYLDL
MWTCARTAIS DKDVVDNKGC HSPFQSELET GLHYDDQLEI YGEVMKMQTP VKDVYAKVEQ
ALERIDTLLE VTKLSTADKT EVLMLAEKAQ ETIDLIKKDG SWGVHGFRYS QKRLDAALTY
VTQAQNILDG VGYSAKKM