| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0468 |
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| Symbol | uvrD |
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| ID | 5660868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 576841 |
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| End bp | 579006 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235006 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001500331 |
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| Protein GI | 157960297 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000657213 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT AGACGGCCTA AACGACAAGC AGCGAGAAGC TGTTGGTGCA
CCGCAATCCA GCATGTTGGT ATTGGCGGGT GCGGGTAGTG GCAAAACGCG GGTGCTCACC
CACAGAATTG CCTGGTTGAT GCAGGTTGAA CAGCAAAGCC CTTATGCAAT TTTAGCGGTA
ACCTTTACCA ATAAAGCGGC AAAAGAGATG CGTGAGCGTG TTGAAAAAGT TGCTGGTGGC
AATATGAGCC GCATGTGGAT CGGTACTTTC CACGGCTTAG CCCACCGCTT GCTGCGTACC
CATTATAAAG ATGCCAATCT GCCTGAGAGC TTCCAGATCT TAGATTCAGA CGATCAACTG
CGTCTGATCA AACGTATTCT AAAAAGCCTT AACTTGGACG AGAAGCAGTA TCCGCCAAGA
CAAGCTCAAG GCTACATCAA TGGTAAGAAA GACTTAGGTC TACGCCCGTC GCATATCGAT
GCGGGCGGCT TCCCGATTGA GCAAAATTTA CTGAAGATCT ATCAGATCTA TCAAGATTCA
TGCGATCGCG CAGGTTTAGT CGATTTTGCG GAAATCTTAC TCAGAGCCCA TGAGCTTTGG
CTCAACAAGC CGCATATTCT GGATCATTAC CAAGACAGGT TTAAGCATAT TCTGGTAGAC
GAGTTCCAAG ACACTAACGC CATTCAATAC GCATGGATCC GTGTACTTGC GGGTTCTACT
GCCAATGTGA TGATAGTCGG TGATGACGAC CAGTCTATCT ACGGCTGGCG CGGCGCTCAG
GTGGAGAACT TGCATAAGTT CTTGGCCGAC TTCCCAGCGG CGCAAACTAT TCGTTTGGAA
CAGAACTATC GTTCGAGCGG TAATATTCTA AATGCCTCGA ACGAGCTGAT TGCCAATAAC
CCAGATCGTA TGGGTAAAAA ACTTTGGACC GACGACAAAG ACGGTGAGCC AATTGGCCTT
TACTGTGCCT TTAACGAAAT GGATGAGGCG CGCTTTATCG TTGGCCGCAT TACCGATTGG
CAAGATGAGG GGGGCAAGTT AGAAGATTGC GCCATTCTTT ATCGTTCCAA CGCTCAGTCC
CGCGTACTGG AAGAAGCCTT ATTGCATAAA GGCATCGCTT ATCGTATCTA TGGCGGCCTG
CGCTTCTTCG AACGCCAAGA GATTAAAGAC GCCATGGGTT ACCTGCGACT TATCAATAAC
AAGAATGATG ATGCTGCCTT TGAGCGTGTG GTGAATACCC CAACTCGTGG TATTGGCGAT
CGCACTCTAG ATATCATTCG TACCACTGCA CGCCAGCAAG AGATGACCCT GTGGGAAGCG
AGTCTTCGCT TACTGGAGGA GAAGGTCCTT AACGGCCGTG CCGCCAATGC CGTACGGGGT
TTTATGGACT TGATTGTCGC CATGAGAATG GACACCGACG AGCAATCTTT GCACCGTATG
ACAGACCATG TGATCCAAAC ATCGGGTCTA AAGGCGATGT ATGAGGCCGA GAAGAGTGAA
AAGGCCCGTG CACGTGTAGA GAACTTAGAA GAATTAGTTA CAGCTGCTCG CAGCTTTGTG
ATGCCTGAAG AGATCGAAGA CATGGGCGAG CTCAATGCCT TCCTGTCTCA CGCAGCGCTA
GAAGCGGGTG AAGGCCAGGC TGATGAGTTT ACCGATGCGG TGCAGTTAAT GACACTACAC
TCGGCAAAGG GTCTTGAGTT CCCAATGGTG TTTATGGCGG GTGTCGAAGA AGGCTTGTTC
CCGAGCCAGA TGGCTATCGA TGAAGGTGAC CGTCTCGATG AGGAGCGCCG TCTCTGTTAT
GTGGGTATGA CCCGTGCCAT GCAGAAGCTG TATATCACCT ACGCCGAGTC GAGACGCATT
TATGGCCGTG AAAGCTTCGC GAGACCTTCA CGTTTTGTAA AGGAAATTCC TGAGCAATAT
GTGCAGGAGA TTCGTATGCG TACTCAGGTT TCAGCGCCAG CAGTCAGCAG TCGCTTTAGT
AAGCAAGATA ATGCCTTCAA TGATTCAGGC TTTAAGATTG GTCAGCGTGT GATGCACCCT
AAATTTGGTG AGGGCACTGT GACCAATTAT GAAGGAAGTG GTGCACAGGC GCGGATTCAG
GTTAACTTTT TCGATGTTGG TAGTAAGTGG TTAGTCATCG CTTACGCGCG CTTGGAATCG
TTATAA
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| Protein sequence | MDVSSLLDGL NDKQREAVGA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYAILAV
TFTNKAAKEM RERVEKVAGG NMSRMWIGTF HGLAHRLLRT HYKDANLPES FQILDSDDQL
RLIKRILKSL NLDEKQYPPR QAQGYINGKK DLGLRPSHID AGGFPIEQNL LKIYQIYQDS
CDRAGLVDFA EILLRAHELW LNKPHILDHY QDRFKHILVD EFQDTNAIQY AWIRVLAGST
ANVMIVGDDD QSIYGWRGAQ VENLHKFLAD FPAAQTIRLE QNYRSSGNIL NASNELIANN
PDRMGKKLWT DDKDGEPIGL YCAFNEMDEA RFIVGRITDW QDEGGKLEDC AILYRSNAQS
RVLEEALLHK GIAYRIYGGL RFFERQEIKD AMGYLRLINN KNDDAAFERV VNTPTRGIGD
RTLDIIRTTA RQQEMTLWEA SLRLLEEKVL NGRAANAVRG FMDLIVAMRM DTDEQSLHRM
TDHVIQTSGL KAMYEAEKSE KARARVENLE ELVTAARSFV MPEEIEDMGE LNAFLSHAAL
EAGEGQADEF TDAVQLMTLH SAKGLEFPMV FMAGVEEGLF PSQMAIDEGD RLDEERRLCY
VGMTRAMQKL YITYAESRRI YGRESFARPS RFVKEIPEQY VQEIRMRTQV SAPAVSSRFS
KQDNAFNDSG FKIGQRVMHP KFGEGTVTNY EGSGAQARIQ VNFFDVGSKW LVIAYARLES
L
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