Gene Spea_0462 details

Gene Information

• Locus tag: Spea_0462
• ID: 5660862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 570582
• End bp: 571061
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641235000
• Product: hypothetical protein
• Protein accession: YP_001500325
• Protein GI: 157960291
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTTT CAAATCCAAT CATAATTTGG GCATGTATCG GAGTTATTCT CGTACTCGCT 
GAGATCATTC TACCGGGTGG TATTGTGATT CTTTTAGGCG CGGCATGCTT AGTGGTCGCA 
AGTGCCTTGG CTATAGGTTT AGTCGAAGGA ATAGTACAAA GCTTAACGCT TTGGTTTATC 
TCATCTATGG TGCTATTGCT GACCTTTCGT CAAGTCACTC AGAAGTTAAT TGGCGGTGAC 
GCTCATATCG GCAACACTGA TGAAGAGTTG GATATTTACG ATCAGCTCGC CATCGTCAAA 
CAAACCATAG GTCCGGCGCA GCAGATGGGA CGGGTTGAAT TTCAAGGCTG TGAATGGTCC 
GCATTAGGGG ATGGTAGCGA GATTGCTGCT GGCTCCCAAG TTAGGGTTAT CTGCAGAGAT 
AATATTGCGT TAGTGGTTGA GCCTATTAAG GCTGAAGACG AGCACTACGT CGAAAAGTAA 

 

Protein sequence

MEFSNPIIIW ACIGVILVLA EIILPGGIVI LLGAACLVVA SALAIGLVEG IVQSLTLWFI 
SSMVLLLTFR QVTQKLIGGD AHIGNTDEEL DIYDQLAIVK QTIGPAQQMG RVEFQGCEWS 
ALGDGSEIAA GSQVRVICRD NIALVVEPIK AEDEHYVEK