Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0450 |
Symbol | |
ID | 5660850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 558677 |
End bp | 560740 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234988 |
Product | hypothetical protein |
Protein accession | YP_001500313 |
Protein GI | 157960279 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAT TTAATAAATG CAAAGCGGCG CTTATTGTCG CCGCGGCTTT CGGTCTAGCA GCCTGTAGCG ACGGTAAAGA TGGTAGTGAC GGTGAAGATG GCACCAGCCC ATTACCGCCG ATAGTCGAAG CTACAGAGAT CACCAATGTT GAAGTGCTAA GTCATACTCT TGAAGAGGGC GCAGTGCGCT TTGAGTTTGA AGTGACTAAC GAAGAAGGCT TGCTGGTTAG CGGTCTTGAA AAAGTGAATG CAGAAGTTGC AGAGTTAACT GATAAAGGTA TTGCTCGTAG TCGCCCAGAA TTTGAGGGCA CCATTGCCGG TGGTAGTGCA TCAGAGGAGA CCGATGGTGC TAGCCTGACC ATGACTGCAG ATGGTCGTTA TGAATTTCTA GCACCAATGC CAGCAGTTAA TGCAGGTACT GAAGGTATAA TCCGACTGGC CGTTGGTGGC GGTGAGAAGA TCGCTAAATC AAACTACATT CTAGTCGACA AGTCAGAGGG CCTTCATACG ACCTCTACGG CAACCTGCCA TACTTGTCAT GTCGACTACG CCGCATCGAA CTTAAAACAT CCAAGCTATA CCGCAATTAA TACCGATGGT GAAACCGATC TGGTCGCAGG TTGTATGGTC TGCCACGGAA ACGTGGTGCG CGATGACGGC GGATACGCGC GTAATTCAAT GCAGAAGATT GGTCATATCA ATCATCAGAA ATTTGAAAAG GATTTCGAGC CAGCTAACTG TTACAGCTGT CATGCTGAGC CTATCACTAA GGTAAACAGT ATGAGTACTT GTACTGACTG TCATGATGCC GCAGGTGTAG GTTCTGCTGC GGTTGCAATG ACCTACAGCA CATTCGATGA GTCAGATGAT GTGCGCTTGT TCCATAAGAA GGTGGGTGAG CGAGCCGATA TTAGAGCGCA GCATTACACA ACCACTTCTG CGCCTTACAC AAACAGCAGT TTGGAGTGGG ATGACCATGA AACCACAGGT GGTTGGTGTA CCGATATCGC ACTGTTTAAT ACCGATGCGG AAACCCCTGT TCAGCTCAAT ATTGCCCAGT TATATGCCGC AGGCACGTTA ACTTATGCCG GAGCGTATAT TCACGCATAC CATAATGATT CCATTGTGGG TCGCCCAAGC CCACGAGATT CAGGTGGTGT CACAAATAGT CAGTACGTTG AAAAGTCAGA TGGCTCTAGA GCCGTGTGTT ATGTGCGCCT TGATGGCATC GATACCGGCT TCGCTAATGC CGGCTTTACT GCTAGCTCAA GGGTGACTTT CAAGCAGCAA GATGATGATG GCGGCTATGA CGGTGTCTCA CTCACTAGTT ACTCTGATGT TGTCGATAGC AACGAGGAAA AACTTCAAGA GTATGAGCGC CGTCATAGTG TCACTTTAGA TAGCTGTACC ACTTGTCACA ACAACGAAAC CAACTATCAC AAGAATGGTA GCTACAATGA TGGTGGTCTA GATTGTGTGG CTTGCCATAA CAATGGTCAA GATCGTGCAG GCCAGCGAGT GGTAGGCCTA GATGCTTTCG CAACTGACAG CTTCCGCATT AATGCGGGCT ACACCATTGC TGCAATCAGT GGTGGTGAAC AAGTTGGTTG GAAGGCCAAT AGTGCGCCAG GCTTTGGTCC TTTAGTGCAT GCCCAGCATT GGGGGCTGCA ATCTGTTATT GGCTCGGAGA TGAGTCGAGA TAATGAGATT GCGGTAACCA ATTCTGCGGC CAAGCTGAAC GCCGATAACT GTGTCTCTTG TCATGCCGAT GGCATCGATC TTAACGCGGT GCCGAATCAA TACATGCTAT CTAGAGCCTT CAACGGTGGA GATGCTGGAG AGTCAGGTGT TGCCTCAAGT CCTATTACCG CTAACTGTTT TGCTTGTCAT AACAACGACC AAGCGCTTAA CCATATGATT TCAAACGGTG GAGAGCTTAA CCTTGAAGTT GATAAGACAA GTGATTGGTT TACTCAACCA ACCTCTGAGT CTTGTGCGAC TTGTCATGCA GAAGGGCGCT CGTACGGGAT CGAGAAGTAT CACGTATTTG ACCGTAAAGA ATAA
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Protein sequence | MRKFNKCKAA LIVAAAFGLA ACSDGKDGSD GEDGTSPLPP IVEATEITNV EVLSHTLEEG AVRFEFEVTN EEGLLVSGLE KVNAEVAELT DKGIARSRPE FEGTIAGGSA SEETDGASLT MTADGRYEFL APMPAVNAGT EGIIRLAVGG GEKIAKSNYI LVDKSEGLHT TSTATCHTCH VDYAASNLKH PSYTAINTDG ETDLVAGCMV CHGNVVRDDG GYARNSMQKI GHINHQKFEK DFEPANCYSC HAEPITKVNS MSTCTDCHDA AGVGSAAVAM TYSTFDESDD VRLFHKKVGE RADIRAQHYT TTSAPYTNSS LEWDDHETTG GWCTDIALFN TDAETPVQLN IAQLYAAGTL TYAGAYIHAY HNDSIVGRPS PRDSGGVTNS QYVEKSDGSR AVCYVRLDGI DTGFANAGFT ASSRVTFKQQ DDDGGYDGVS LTSYSDVVDS NEEKLQEYER RHSVTLDSCT TCHNNETNYH KNGSYNDGGL DCVACHNNGQ DRAGQRVVGL DAFATDSFRI NAGYTIAAIS GGEQVGWKAN SAPGFGPLVH AQHWGLQSVI GSEMSRDNEI AVTNSAAKLN ADNCVSCHAD GIDLNAVPNQ YMLSRAFNGG DAGESGVASS PITANCFACH NNDQALNHMI SNGGELNLEV DKTSDWFTQP TSESCATCHA EGRSYGIEKY HVFDRKE
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