| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0439 |
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| Symbol | |
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| ID | 5660839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 546608 |
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| End bp | 547510 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234976 |
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| Product | formate dehydrogenase, beta subunit |
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| Protein accession | YP_001500302 |
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| Protein GI | 157960268 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGCTC AAGATATCAT TTTAAGCTCT GGCACATCAG AGCTCACTCC TGCAGCGCAG
GTACGCCGTA AGTTAAGTAA GGTGGCCAAG TTATTCGACG CCACTAAGTG TAACGGCTGT
AAGGCTTGCC AGGTGTCTTG TTCTGAATGG AACGATCTGC GTGCGCCAGT GGGGAGCTTC
CAAGGTTCTT ACCAGAACCC AATGGACCTG TCTTCAGAGT GTTGGACACT GATGAAGTAT
CAGGAAGTGG AAGAGAACAA TAAACTAAAT TGGCGTTTCG CCCACAGCGC ATGTATGCAC
TGTGACGATC CTGCCTGTTT AACCGCTTGT TCGACCAAAG GCGCCATCGT GCAACGCGCA
AACGGCGTGG TGGATTTTGA TTCTGATAAG TGTACTGGTT GTGGCTACTG CGTTTCGGCT
TGTCCGTTCG ATGTACCAAG ACTCGACCCT ATCGATCAAA AGGCTTACAA GTGCACCATG
TGTTCAGACC GTATCCAAGT GGGCCAAGAG CCTGCCTGTG TGAAGTCTTG TATTACTGGC
GCACTGAAGT ACGGCACCCG TGAAGACATG CTGTTTATTG CAGACTTACG GATTAAAGAG
CTGCGTAAGC GCGGCTATGT TAATGCCGGT CTATACAACC CAGAAGGTGT GGGCGGTACA
GGCATGATTA TGATTTTGCA TGACATTAAT CAGCCACAAA ACTACGGCCT ACCAGCCGAT
CCGAAAACGA GTGTGCCAAT TAAGTTATGG CAAGACGTGG TTAAGCCATT GGGTGCTGCA
GGTATCATCG CAACAGTTGC TGTTGCGTGT CTACACCGCA TCACTGTGGG GCGTAACCTT
GTTGAAGAGG ACGAACCTGC ACAGTTCGAC CACACTCACT CAGATAAGTC AGATAAGGAG
TAA
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| Protein sequence | MSAQDIILSS GTSELTPAAQ VRRKLSKVAK LFDATKCNGC KACQVSCSEW NDLRAPVGSF
QGSYQNPMDL SSECWTLMKY QEVEENNKLN WRFAHSACMH CDDPACLTAC STKGAIVQRA
NGVVDFDSDK CTGCGYCVSA CPFDVPRLDP IDQKAYKCTM CSDRIQVGQE PACVKSCITG
ALKYGTREDM LFIADLRIKE LRKRGYVNAG LYNPEGVGGT GMIMILHDIN QPQNYGLPAD
PKTSVPIKLW QDVVKPLGAA GIIATVAVAC LHRITVGRNL VEEDEPAQFD HTHSDKSDKE
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