| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0437 |
|---|
| Symbol | |
|---|
| ID | 5660837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 543585 |
|---|
| End bp | 544166 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641234974 |
|---|
| Product | molybdopterin oxidoreductase Fe4S4 region |
|---|
| Protein accession | YP_001500300 |
|---|
| Protein GI | 157960266 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAC GACAGTTTTT TAAACTGTGT GCCTGCGGAG CGACCACATC GGCAATATCA
GCGTTGGGAT TAATGCCCGG CACTGCGATG GCTGCGCCTC GTGAGTATAA GTTGTTGAAA
GCAAAAGAAA CCCGCAATAA CTGCTGTTAT TGCTCTGTGG GTTGTGGCTT GTTGATGTAC
AGCTATGGCA GCAACGGTAA AAACGCTGAA AAAGCGATTT TCCACATTGA AGGCGACGCT
GACCATCCGG TTAACCGCGG CGCATTATGC CCTAAAGGTG CGGGCCTAGT GGACTATGTA
AATAGCCCTA ACCGTAACCA TTTCCCTGAA GTGCGTGAGC CAGGCTCTAA CGAGTGGAAA
CGTATCAGCT GGAATGAGGC ATTTAGCCGT ATCGCGCGCT TGATGAAAGA TGACCGCGAT
GAAAACTTCA TTGAAAAAAA TAGTGATGGC ACCACAGTAA ACCGTTGGTT GAGTACCGGC
ATGATGACTT CATCTGCACA GCCAAACGAA GGTGGTTTTA TTACTCACAA GTTTGCTCGT
TCTCTTGGCC TAGTGGCCAT CGATACTATT GCGCGTAACT GA
|
|---|
| Protein sequence | MDRRQFFKLC ACGATTSAIS ALGLMPGTAM AAPREYKLLK AKETRNNCCY CSVGCGLLMY
SYGSNGKNAE KAIFHIEGDA DHPVNRGALC PKGAGLVDYV NSPNRNHFPE VREPGSNEWK
RISWNEAFSR IARLMKDDRD ENFIEKNSDG TTVNRWLSTG MMTSSAQPNE GGFITHKFAR
SLGLVAIDTI ARN
|
|---|
| |