| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0432 |
|---|
| Symbol | purH |
|---|
| ID | 5660832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 537651 |
|---|
| End bp | 539240 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641234969 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001500295 |
|---|
| Protein GI | 157960261 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG CCAGACCTAT TCGTCGCGCG CTGTTAAGCG TTTCAGATAA AACCGGAATC
CTAGAGTTTG CACAAGCGCT GCATGCTCAA GGTGTTGAGC TACTTTCTAC TGGTGGCACC
GCACGCCTGC TGGCTGATAA TGGCGTGCCT GTCATTGAAG TATCAGATTA TACTGGTCAC
CCAGAGATCA TGGATGGCCG CGTTAAAACC CTGCACCCTA AAGTGCATGG CGGTATTTTA
GCGCGTCGCG GTATCGACGA AATCGTAATG GAACAAAACA ACATCAAGCC TATCGACTTG
GTTGCAGTTA ACTTGTATCC GTTTGCTGCT ACCGTTGCTC AAGAAGGTTG CACGCTTGCT
GACGCTATCG AGAACATCGA TATCGGCGGC CCTACTATGG TGCGATCTAC CGCTAAAAAC
CATAAAGACA CTACTATCAT CGTTAACGCG AAAGATTACG GCCGCGTTAT TGCAGAAATG
CAATCAAACG AAGCTAGCAC TACCCTTGAG ACTCGCTTTG ATCTAGCGAT TGCAGCGTTT
GAGCACACTG CCGCATACGA TGGCATGATT GCTAACTACT TCGGCACTAA AGTACCTGCA
CACAGCAATG ACGAGTGCCA TGAAGATTCT AAGTTCCCAC GCACTTACAA CACTCAGCTA
GTTAAGAAGC AAGACTTGCG CTATGGCGAA AATAGCCACC AAACAGCCGC TTTCTATGTT
GATACAAATC TTGATGAAGC CTCTGTTGCC ACCGCCGTTC AACTGCAAGG TAAGGCACTG
TCATACAATA ACATCGCCGA TACCGACTCT GCACTTGAGT GCGTAAAAGA GTTCGACGAG
CCAGCTTGTG TGATTGTTAA GCATGCTAAT CCATGTGGTG TGGCTATTGG TGAAAACCTA
CTTGAAGCTT ATAACCGTGC ATTCCAAACT GACCCAACGT CGGCTTTCGG TGGCATCATC
GCCTTTAACG GCGAGCTAGA TGCAGCAACT GCTAGCGCGA TTGTTGAGCG CCAGTTTGTT
GAGGTGATCA TAGCCCCTAA AGTTAGCCAA GCAGCCCGTG ACGTTATTGC TGCTAAAGCA
AACGTACGCT TGCTTGAGTG TGGTGAGTGG GCAGCAAAAA CCACCAGCCT AGATTACAAG
CGTGTAAACG GCGGCCTATT ACTACAAGAT CGCGACCAAG GCATGGTTGG TCTTGATGAC
GTTAAGGTTG TTTCTAAGCG CCAACCAACG GCTGAAGAGA TGAAAGATCT AATGTTCTGC
TGGAAAGTGG CTAAGTTTGT TAAATCAAAC GCCATTGTTT ACGCCAAGAA CAGCATGACA
ATCGGTGTAG GTGCAGGCCA AATGAGCCGA GTTTACAGCG CTAAGGTTGC AGGTATTAAA
GCCGCAGACG AAGGCCTAGA AGTACAAAAC TCAGTAATGG CATCAGATGC GTTCTTCCCA
TTCCGTGATG GTATCGATGC TGCAGCAGAA GCAGGCATTA GCTGTATCAT CCAGCCTGGC
GGCTCTATCC GCGATGAAGA GATCATCGCA GCAGCTGATG AGCACGGCAT GGCAATGGTA
TTTACCGGTA TGCGTCACTT CCGTCATTAA
|
|---|
| Protein sequence | MNNARPIRRA LLSVSDKTGI LEFAQALHAQ GVELLSTGGT ARLLADNGVP VIEVSDYTGH
PEIMDGRVKT LHPKVHGGIL ARRGIDEIVM EQNNIKPIDL VAVNLYPFAA TVAQEGCTLA
DAIENIDIGG PTMVRSTAKN HKDTTIIVNA KDYGRVIAEM QSNEASTTLE TRFDLAIAAF
EHTAAYDGMI ANYFGTKVPA HSNDECHEDS KFPRTYNTQL VKKQDLRYGE NSHQTAAFYV
DTNLDEASVA TAVQLQGKAL SYNNIADTDS ALECVKEFDE PACVIVKHAN PCGVAIGENL
LEAYNRAFQT DPTSAFGGII AFNGELDAAT ASAIVERQFV EVIIAPKVSQ AARDVIAAKA
NVRLLECGEW AAKTTSLDYK RVNGGLLLQD RDQGMVGLDD VKVVSKRQPT AEEMKDLMFC
WKVAKFVKSN AIVYAKNSMT IGVGAGQMSR VYSAKVAGIK AADEGLEVQN SVMASDAFFP
FRDGIDAAAE AGISCIIQPG GSIRDEEIIA AADEHGMAMV FTGMRHFRH
|
|---|
| |