Gene Spea_0420 details

Gene Information

• Locus tag: Spea_0420
• Symbol: aceF
• ID: 5660820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 514693
• End bp: 516555
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641234957
• Product: dihydrolipoamide acetyltransferase
• Protein accession: YP_001500283
• Protein GI: 157960249
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; [COG0511] Biotin carboxyl carrier protein
• TIGRFAM ID: [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0458953
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATCG AAATTAATGT ACCAGATATC GGTGCGGATG AGGTTGAAGT AACAGAGATC 
CTTGTTAGCG TAGGCGACAA GGTTGAAGAA GAGCAATCGC TTATCTCTGT TGAAGGCGAT 
AAAGCTGCGA TGGAAGTTCC GGCTTCTGCA GCGGGTATTG TTAAAGAAAT TAAAGTAGTA 
GTAGGTGATA AAGTGTCTAC CGATTCATTG ATTATGATCT TTGAATCTGA AGGCGCAGCG 
TCTGCTCCAG CAGCTGTCGA GGCTGCACCT GTTGCGGCTC CTGCTGCACC AGCTGCGGCA 
GCTGCGGCAG AGCTAAAAGA AGTTCACGTC CCAGATATTG GTGACGACGA AGTTGAAGTG 
ACTGAAATTT TAGTGACTGT TGGCGACAGC ATCACTGAAG AGCAATCGCT AATGAGCGTT 
GAAGGTGACA AAGCTTCTAT GGAAGTACCT GCACCATTCG CTGGTGTGCT GAAAGAGATA 
AAAGTGAACC TTGGTGACAA GGTTTCTACA GGTAGCCTAG TGATGGTATT TGAAGTAGCT 
GGTTCTGCAG CGGCTCAAGC ACCTGCTGCG GCAGCCGTTG CTGCTCAAGT AGCATCTGCG 
CCATCAGTGC AAGATGTCAA CGTACCAGAT ATTGGCGGTG ATGAAGTTGA AGTGACTGAA 
ATCATGGTTA AAGTTGGCGA CACTGTTACC GAAGAGCAAT CACTTATCAG CGTTGAAGGT 
GATAAGGCTG CGATGGAAGT GCCTGCACCG TTTGCTGGTA AAGTGTTAGA CATTAAAGTG 
GCTCAAGGCG ATAAAGTATC GACAGGCTCT TTGATTATGA CTTTTGAAGT TGCAGGTAGC 
GCACCTGTTG CTGCACCTGC ACAAGTTGCA GCGCCAACAG TTGCTCCTAC TGCGAGCCAA 
GCACCAGCAG CGAAAGAAGA TTTTGTAGAG AATCATGCAT ACGCTCATGC TTCACCGGTT 
ATCCGCCGTA TGGCACGTGA ACTAGGCGTT AACCTAGCTA ACGTTAAGGG TACAGGTCGT 
AAGAACCGTA TCATTAAAGA AGATGTTCAA AACTACATCA AAGCGGTGAT TAAGCAAGTT 
GAGTCAGGCG CAGTTAAAAC AGCCGCTGCT GGTGGCGAGC TAAACCTACT TGCATGGCCA 
AAAGTGGACT TCAGCAAGTT TGGTGAAACA GAAGTTAAAC CGTTATCACG TATTCAGAAG 
ATTTCTGGTG CTAATCTACA CCGTAACTGG GTGAAGATCC CGCATGTTAC CCAGTGGGAT 
GACGCAGATA TCACTGAACT AGAAGCTTTC CGTAAGGCGC AAAATGCTGC CGAAGCGAAG 
AAAGACTCTG GCATGAAGAT TACGCCGCTT GTGTTCATCA TGAAGGCTGT TGCTAAAGCG 
CTAGAAGCGT TCCCAACCTT TAACTCTTCA CTGTCAGAAG ACGGCGAAAG CTTAATTTTG 
AAGAAGTACG TTAACGTAGG TATTGCAGTA GATACACCAA ACGGTTTAGT TGTTCCTGTG 
TTTAAAGACG TGAACAAGAA AGGCATTCAT GAGCTTTCTG ATGAGCTGAA AGAGATCTCT 
AAGAAAGCCC GTGGTGGTAA GTTAACTGCT GCAGATATGC AAGGCGGTTG CTTCACTATC 
TCTAGCTTAG GTGGCATCGG CGGTACGGCA TTTACGCCAA TCGTTAACGC ACCAGAAGTG 
GCTATTCTTG GTGTGTCTAA GTCAGACATG AAGCCTGTTT GGAATGGTAA AGAGTTTGAG 
CCGCGCTTAA TGTTGCCGCT ATCACTGTCT TATGATCATC GAGTGATTGA TGGTGCCGAT 
GGTGCGCGCT TTATCACGTA CTTGAATAAC TGCTTGTCAG ACATTCGTAC CTTAGTGCTA 
TAA 

 

Protein sequence

MTIEINVPDI GADEVEVTEI LVSVGDKVEE EQSLISVEGD KAAMEVPASA AGIVKEIKVV 
VGDKVSTDSL IMIFESEGAA SAPAAVEAAP VAAPAAPAAA AAAELKEVHV PDIGDDEVEV 
TEILVTVGDS ITEEQSLMSV EGDKASMEVP APFAGVLKEI KVNLGDKVST GSLVMVFEVA 
GSAAAQAPAA AAVAAQVASA PSVQDVNVPD IGGDEVEVTE IMVKVGDTVT EEQSLISVEG 
DKAAMEVPAP FAGKVLDIKV AQGDKVSTGS LIMTFEVAGS APVAAPAQVA APTVAPTASQ 
APAAKEDFVE NHAYAHASPV IRRMARELGV NLANVKGTGR KNRIIKEDVQ NYIKAVIKQV 
ESGAVKTAAA GGELNLLAWP KVDFSKFGET EVKPLSRIQK ISGANLHRNW VKIPHVTQWD 
DADITELEAF RKAQNAAEAK KDSGMKITPL VFIMKAVAKA LEAFPTFNSS LSEDGESLIL 
KKYVNVGIAV DTPNGLVVPV FKDVNKKGIH ELSDELKEIS KKARGGKLTA ADMQGGCFTI 
SSLGGIGGTA FTPIVNAPEV AILGVSKSDM KPVWNGKEFE PRLMLPLSLS YDHRVIDGAD 
GARFITYLNN CLSDIRTLVL