| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0417 |
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| Symbol | |
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| ID | 5660817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 509947 |
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| End bp | 510795 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234954 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001500280 |
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| Protein GI | 157960246 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTGT TTGCGTTATT AGTCGCAATT TTAGTTGAGA GATTACGACT TTTGCCTAAT
TCTTGGCAGT TTGATGCCTT GTTATCAAAA TATAACAGGT CGCTTATCAG TGAACAGCAG
CCATCATTTT TGATAATGAC ATTAGCGATT CTACTGCCCG CAGTTCTTGT CTATATCTTG
TCTTGGCTAG TGTCTGGCGT GTTATGGGGA GCTGTCAGTG TGGCGCTATG GGTGTCGATT
GCCGTGCTTT GCTTTAGCCA TAATGTACAA AGAACGGCCT TCAAGCGTTA TATACAAGCG
GCTTGCCGTG GTGACTCACA AGCCTGCTTT AATTATGCCA ATGAGTTGGA TTCTAGCCTC
TGTTTAGAGT CAGTTAATGA GAAGGAACTG GGCGAAAAAG TAGGCCAAAG TGTCGCGTGG
ATCAATTATC GCTATTACGG TGCGATTGCA CTTTATCTTA TTATCCTAGG GCCTGTAGGC
ACAGTGCTTT ATTGCACGGT ACGTTTTTAT AGTGAACAGA GCCGTAAGCA TGATTCTGCT
CTGCCTTTAG TTGATAACCT ACTATTCGTA CTTGATTGGA TCCCAAGTCG AGTATTTTCA
TTTGGTTACG TGTTAAGTGG CCATTTCAGA CAAGCCATTT CAGCCTGGTT GTCACATGCA
TTGAATCCTC AATCTTCGGC TCGTGACACG ATTACTCAAG TCGCAGTTGC AGCAGAAACA
TTGCCCGAGT CATCATCGGC ACCCATTTGT TTACAGTCGA CTATCGCACT GCTGCAGTTG
AGCAAGCGTA ATTTTATCCT ACTGATTACC GTACTTTCGT TGATGACAAT ATTTGGAGTG
GTGAGTTAG
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| Protein sequence | MALFALLVAI LVERLRLLPN SWQFDALLSK YNRSLISEQQ PSFLIMTLAI LLPAVLVYIL
SWLVSGVLWG AVSVALWVSI AVLCFSHNVQ RTAFKRYIQA ACRGDSQACF NYANELDSSL
CLESVNEKEL GEKVGQSVAW INYRYYGAIA LYLIILGPVG TVLYCTVRFY SEQSRKHDSA
LPLVDNLLFV LDWIPSRVFS FGYVLSGHFR QAISAWLSHA LNPQSSARDT ITQVAVAAET
LPESSSAPIC LQSTIALLQL SKRNFILLIT VLSLMTIFGV VS
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