| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0416 |
|---|
| Symbol | |
|---|
| ID | 5660816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 509338 |
|---|
| End bp | 509880 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641234953 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_001500279 |
|---|
| Protein GI | 157960245 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCTGA CTTTAGTCGA TGGTTGGGTG GCGCAGGCGA GATGCTGCCA GTCACCACAT
TTTAATGCTA GGCCGCTTCA TGAAGTGAGC TTGCTGGTGA TCCACAATAT TAGCCTGCCA
GCAGGCTGTT TCGGTCAGCC TTATATTGAT CAGTTATTTC AAGGTTGCCT CGATATTGAA
GCCGATACTA GCTTTAAAGA TTTACAAGGC TTAGAAGTGT CGGCGCACTT TCTAATAAGG
CGCGACGGTG AGTTGGTGCA GTATGTCTCT TGTGATGATA GAGCTTGGCA TGCCGGGGTA
TCTGAGTTTG AGGGCCGTAG CAATTGTAAT GACTTTGCCC TTGGTATTGA GCTTGAAGGC
ACTGATGCTC TCGCTTATTC GGAGGAGCAG TATCTAAGGC TTATTGAGTT AACTAGGAGC
CTAATGGTTC ATTATCCAGA TATAACACTT GCAAGAATTA CTGGGCATAG TGATATCGCA
CCGGGACGCA AAACCGATCC GGGTAATGGC TTTGATTGGC AGCGTTATAA AGCTGCATTG
TAA
|
|---|
| Protein sequence | MSLTLVDGWV AQARCCQSPH FNARPLHEVS LLVIHNISLP AGCFGQPYID QLFQGCLDIE
ADTSFKDLQG LEVSAHFLIR RDGELVQYVS CDDRAWHAGV SEFEGRSNCN DFALGIELEG
TDALAYSEEQ YLRLIELTRS LMVHYPDITL ARITGHSDIA PGRKTDPGNG FDWQRYKAAL
|
|---|
| |