| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0413 |
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| Symbol | |
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| ID | 5660813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 505266 |
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| End bp | 506972 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234950 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001500276 |
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| Protein GI | 157960242 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAA CCGGCCTTCA CTTAGGGTTA TCGACCCTCT TTATTCGCAA AGGTTTGCTT
AATGAAAAGC AGCTAAGTGA AGCCGTGTCT AAAAGTCGCA AGCTCCGTCA GGGGCTTGTG
GCTACTTTAG TAAAGGATAA CTTGATTAGC GCTCGTGAAA TCGCAGAGTT ATGCTACGAA
GAATACGGCA CACCGCTATT AGACTTAAAC GAGTTCGAGA TAGGCTCCAT CCCCGAAGAA
TTCCTCAATA AGAAACTGAT AGAGAAGCAC AAATGCTTGC CACTTTTTAA GCGCGGTAAT
CGTCTCTATA TCGCCACATC CGACCCTACA AACATAGCAG CTTTAGAAGA CTTTCAGTTT
AGTGCCGGTT TGCATGCAGA AGCGATTCTA GTCGAGGACG ATAAGCTCAG TAAAGCTATA
GACTCTATTC TCGAAGACGA TATTAGCGGC CTAGACTTAA GTGCGATAGA CGAAGAAGCC
TTGGCAGGTA TAGAAGTTAC AGATACAGAC AAACGTGATG AGGAAGAAAA CAGTGGTAAA
GACGACGCGC CGATCGTTAT CTATATCAAT AAAATCCTCA CCGATGCCAT TCGCAAAGGC
GCATCAGATC TGCATTTTGA GCCCTATGAA AAGCGTTACC GCATCCGTTT TCGCATCGAC
GGTATTTTAC ATGAGGTCTC CGAGCCACCA GTAAATCTTT CCGGTCGCAT CTCTGCCCGC
TTAAAGGTGA TGTCAAAACT TGATATTGCC GAACGCCGAG TGCCGCAAGA TGGTCGTATC
AAGATGAAGC TATCGCGCAC CAAATCTATC GACTTTCGTG TCAGCACCTT GCCTACCATC
TGGGGCGAGA AGATTGTAAT GCGTATCTTG GACTCATCAT CCGCTCAGCT TGGCATCGAA
AAACTCGGCT ATGAAGATGA CCAAAGATTA CTGTATGAAG AGATGCTGCA AAAACCGCAA
GGGATGATCT TGGTAACAGG CCCTACAGGC TCGGGTAAAA CGGTATCGCT TTATACTGGC
CTTAATATTC TTAACACCGA AGAGCGTAAT ATCTCTACCG CCGAAGATCC GGTTGAGATT
AATCTCGAAG GGGTCAACCA GGTTCATATC AATCTTAAGG CAGGTCTAAC CTTCGCATCA
GCGCTACGTT CATTCCTGCG ACAAGACCCC GATGTGGTCA TGGTCGGTGA AATTCGAGAT
TTGGAAACTG CTGAAATTGC CATTAAAGCG GCGCAAACCG GGCACTTGGT TCTTTCGACT
TTGCATACTA ACTCCGCTGC AGAAACACTC ACCCGCTTAA TCAACATGGG CGTCCCCGGT
TACAACATCG CTAGCTCGGT CAACCTGATT ATCGCTCAGC GGCTATCGAG GCGCCTCTGC
CCAACCTGTA AAGCGCCTGA AGCGATCCCA GCAGAAGAGT TATTAAAGCT CGGCTTTAAC
CAGCAACAAG TCGATGCAGG CATTATCCCC CACAAACCCG TGGGTTGTGA CCTATGCTCC
GGCGGTTATA AAGGCCGAGT CGGTATCTAT GAGGTAATGA AGATGTCGGA TGAAATTGCT
CGCACTATTA TGGAAGGCGG TAATTCACTG CAAATCCTTA AGCAAGCCAA ACTTCAAGGC
ATGCGCGACT TACGAGATTC AGGCCTGCTA AAAGTCATCC AAGGCGTCAC CAGTATTGCA
GAAATAAACC GCGTCACTAG CTTTTAA
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| Protein sequence | MPTTGLHLGL STLFIRKGLL NEKQLSEAVS KSRKLRQGLV ATLVKDNLIS AREIAELCYE
EYGTPLLDLN EFEIGSIPEE FLNKKLIEKH KCLPLFKRGN RLYIATSDPT NIAALEDFQF
SAGLHAEAIL VEDDKLSKAI DSILEDDISG LDLSAIDEEA LAGIEVTDTD KRDEEENSGK
DDAPIVIYIN KILTDAIRKG ASDLHFEPYE KRYRIRFRID GILHEVSEPP VNLSGRISAR
LKVMSKLDIA ERRVPQDGRI KMKLSRTKSI DFRVSTLPTI WGEKIVMRIL DSSSAQLGIE
KLGYEDDQRL LYEEMLQKPQ GMILVTGPTG SGKTVSLYTG LNILNTEERN ISTAEDPVEI
NLEGVNQVHI NLKAGLTFAS ALRSFLRQDP DVVMVGEIRD LETAEIAIKA AQTGHLVLST
LHTNSAAETL TRLINMGVPG YNIASSVNLI IAQRLSRRLC PTCKAPEAIP AEELLKLGFN
QQQVDAGIIP HKPVGCDLCS GGYKGRVGIY EVMKMSDEIA RTIMEGGNSL QILKQAKLQG
MRDLRDSGLL KVIQGVTSIA EINRVTSF
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