| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0401 |
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| Symbol | |
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| ID | 5660801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 484439 |
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| End bp | 487420 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641234935 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500264 |
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| Protein GI | 157960230 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00163541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAA GTAACGCATT AAAGCGATAT AGACCTCAAA AGACTTTGGC GGCTCTAGCA
GTCGGTTCGG TTCTATTTTT ATCCGCACCT GCAGCGATGG CTGCCGATGG TTTAGGTGTG
ATGCAAGGTC ATATTACTAC TGAGTCTGGT TCGAACCTCA GTAATGCAAA AGTGATCATC
AAGCATGAGT CAAAAGGAAT TGTGAGAGAA ACGACAACTG GTGCCAATGG TAGCTTCTCT
CTCAAAGGGC TACCAATTGG TAAATATACC GTGTCCATTT CTAAAGATGG TTACTATAAA
GTCAGCGAGC AGCACATTGC AGTTACTATA GGTAATGCAT TGACTTTCGA TGTTGCTCTC
GATTTAGAAG ATTCTGGTGT AGAGCGAATT GCAGTTAGTG GTGCAAGAAT TAGCCGTGTA
GATACCTCTA GTACTACAAC GTCACAAGTT ATCTCTATGA GTGAACTTAA CCAATTACCA
GTTGAGTTAG ATTCAACTGC AATTGCCTTG CTAACCCCTG GCTCTGTAGC TGGTGATGAT
GGTTTTGGTG GCGTTGCTAT TGGCGGCTCA TCAGTTGCTG AAAACGGTTA TTACCTAAAC
GGATTGAATA TTACTGATTT GCGTAAAGGC ATGGGAGACA TCGATCTTCC TTGGGAAGCT
ATTGCACAAA CTGAAGTACA AACGGGTGGT GTGTCTGCAG AATATGGCCG CTTTATCGGT
GGTGTTGTAA GTTTAGTGTC TAAGTCGGGT GATAATGAGT GGAAGTTTGG GGCAAAAGCT
GAAATTGCTC CGGATTCATT AGCTGAGCCG ACGTTACGAA TGAAAGATGA CGGCACTATT
GAAGAAGCTA AAGAAGGCTA TTGGCAAGAA ACTGAATATA ATATTTGGGC TTCAGGAGCA
TTGATTGAAG ACAAACTATT CTTCTATGGC TTGTGGAATC CATTTGAAGA AGATGTCACT
GCATATGATG AGAATCAGAT AAGTGATAAA GAGTGGAAAA CTAACCGTTG GTTCACCAAA
GTGGATTGGT TTATCCACGA AGATCATTCT ATCGGTGTAA TGGCCTTTAG TAATGAAGGT
GATTATGAAA AGACAGAATT CCAACGAGCA GATGATGGTG GCCGTGGTGA TGAAATTGGT
CTAACGGAAA CAACCTATGG CGGAATTGGT TGGAACGCTC TATATACAGG TTATCTAACA
GACGATATCA CTTTATCTGC AATGTATGGT GAGATCACTC AATCTACTAA AGATAACTCA
GGTACGTTAG ATCAATCTAC CTACTGGGAT CTTCGTTCTG GAACTTGGGA GCGTTTAGGT
GATTGGGTCG GCTATGGCTC TTCAGAAACA GAAGACAAGC GAATTACTTA CCGTATCGAT
TTAGACTGGG TAATTGGCGA TCATACATTA CGAGCTGGCT ATGACTATGA GCGTCTAGAA
ATTGCTGATA TTTATACACC TCATGGTGAG GGCTGGTATG AGTATTTTGC TGCGGGCGCA
GATAATGCCT ACGGTCTGGC AGAAGGTACT GAATATGCGG ATTTACGTAT TTGGGGCAAA
AATAGTGAGA CTGAAAACGT TCATACTGCA TTATATGTCT CAGATACTTG GGCTGTGACA
GATACTGTAA CTATTAATGC AGGTGTTCGA TATAGCGAGT TTAGCAACAC AACGGGCTCT
GGTGACAAGT ATGTCGATCT TGACGGTCAG TTCGCACCTC GCTTAGGTGC AACATGGGAT
GTATTAGGTG ATGGGGCTAG TAAACTATAT GCTTCTTATG GTCGTTATTT CCAGCCAGTG
TCTCCAAATA CAAATCTACG TATGGCGTCA GCTGCTTATG ATTCCCATAT TGTTAGTCAC
CTTGACGGTG TTAATGCAGA TGGCTCTCCA ATATTAGGAG ATGAAATTAG CCGTCGAGTT
GTTGCTGACG GATCAGTACC TGATGCTGAT CAGCTGTTTA ACAATAAAGC AGGTTCAATG
TATTCCGATG AATTTGCAAT TGGTTATCAG CAGCAGGTAA GTGATGATTG GGCTGTTGGT
ATTCGTGGTG TTTATCGCGA TCTTAAGCAA TCGATTGAAG ATGTATCGTT TAACTACGGT
ATGAACCAAT GGATTTTAGA TAACTATGAT GCAAATACGT GGCATGCCGG GAATGGTGAA
ACAAGTGCTG AAGATTACTT TGTTGGTGGC TGGTTCCCAA CCCTAACGAA TCCAGGGATA
GGAACAGAGA TCTATTATGA TGTTGATGGT GACGGAGTTA AAGAAACTGT CAATGTTAAT
GCGGATCAGA TGGGATTCCC GGAAGCTGAA CGTACTTATA AGGCAATTGA GCTGAACTTC
AGCGGTAATG TAACAGAAGA CTTTACACTA AATGGTTCTT ATACCTGGTC CAAGAGTGAA
GGTAATACTG AAGGTTTAGT TCGTTCGGAT AACGAGCAGG CCGATCCAGG TTGGACTACG
TCATTCGATT ATCCTGAACT AATGGATAAC GGTGATGGAT ACTTACCAAA TGATCGTCGT
CATAACTTTA AACTATACGG TGTTTATAAC ATTACTGATG ATTTCAGTGT TGGTTTTAAC
TCATACCTAC AATCAGGTCG ACCAATTAAC GCCTTTGGAA TACATCCAGA AGATCAAGGC
TACTGCGTGC AGGCTGTAGC AATCGATGGA ACTTGTTATG GTCGAGATTG GTATGGAGCT
TCATCCTTCT ATGCTGACGG CGAAGCAGCA CCACGTGGCA GCATGGGGCG TACTGACTGG
ATATATAACA TTGATCTAAA CATGTCATAC ACTATGGACT TTAATGAAGC TGGTCGCCTG
AACTTCAAGT TGAATGTATA TAATCTATTC AACTTCGATG GAGTTAAAGG TGTTGATGAG
CAGTACGAGT TTGATAGTGG TGCGAAGAAC CTTCGTTATG GCTACCCAGA TAGTTTCCAG
ACTCCACGTT ATGTTAGAGC ATCTGTTCGT TATGACTTCT AA
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| Protein sequence | MSGSNALKRY RPQKTLAALA VGSVLFLSAP AAMAADGLGV MQGHITTESG SNLSNAKVII
KHESKGIVRE TTTGANGSFS LKGLPIGKYT VSISKDGYYK VSEQHIAVTI GNALTFDVAL
DLEDSGVERI AVSGARISRV DTSSTTTSQV ISMSELNQLP VELDSTAIAL LTPGSVAGDD
GFGGVAIGGS SVAENGYYLN GLNITDLRKG MGDIDLPWEA IAQTEVQTGG VSAEYGRFIG
GVVSLVSKSG DNEWKFGAKA EIAPDSLAEP TLRMKDDGTI EEAKEGYWQE TEYNIWASGA
LIEDKLFFYG LWNPFEEDVT AYDENQISDK EWKTNRWFTK VDWFIHEDHS IGVMAFSNEG
DYEKTEFQRA DDGGRGDEIG LTETTYGGIG WNALYTGYLT DDITLSAMYG EITQSTKDNS
GTLDQSTYWD LRSGTWERLG DWVGYGSSET EDKRITYRID LDWVIGDHTL RAGYDYERLE
IADIYTPHGE GWYEYFAAGA DNAYGLAEGT EYADLRIWGK NSETENVHTA LYVSDTWAVT
DTVTINAGVR YSEFSNTTGS GDKYVDLDGQ FAPRLGATWD VLGDGASKLY ASYGRYFQPV
SPNTNLRMAS AAYDSHIVSH LDGVNADGSP ILGDEISRRV VADGSVPDAD QLFNNKAGSM
YSDEFAIGYQ QQVSDDWAVG IRGVYRDLKQ SIEDVSFNYG MNQWILDNYD ANTWHAGNGE
TSAEDYFVGG WFPTLTNPGI GTEIYYDVDG DGVKETVNVN ADQMGFPEAE RTYKAIELNF
SGNVTEDFTL NGSYTWSKSE GNTEGLVRSD NEQADPGWTT SFDYPELMDN GDGYLPNDRR
HNFKLYGVYN ITDDFSVGFN SYLQSGRPIN AFGIHPEDQG YCVQAVAIDG TCYGRDWYGA
SSFYADGEAA PRGSMGRTDW IYNIDLNMSY TMDFNEAGRL NFKLNVYNLF NFDGVKGVDE
QYEFDSGAKN LRYGYPDSFQ TPRYVRASVR YDF
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