| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0400 |
|---|
| Symbol | |
|---|
| ID | 5660800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 482881 |
|---|
| End bp | 483792 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641234934 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001500263 |
|---|
| Protein GI | 157960229 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.171891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC CTCTTTATGC TGCCATTACG TTAGGCTCAA ATAGTTTTAA TATGCTGGTC
GCGAAAACCG TTGCTCAGCA GCCTAAAGTT ATTGCCAAGT ACAAACGTAA GGTCCGCTTA
GCCGAAGGGA TCCAGGCCGA TGGTTCCCTG AGTGAAGAGG TGCTATTACG TGGTTTAGAT
TGTCTAACCA TGTTCGCAGA GATGCTCCGC AAAGAAGGTA TTTCTGCTAA TAATGTAGCT
GTGATTGCCA CGGCTACATT GAGAAATATT TCTAACTCTG ATGACTTTTG TCGGCGAGCC
TTCCCCATTC TAGGTCACCC TATCGAGATT ATTTCTGGCA TGCGAGAGGC CGAGCTTATC
TATCTGGGTA TGGTCGCGAC CACTGCAGGT GAGGGGCGTC GCCTTGTCAT CGATATTGGT
GGAGCTAGCA CCGAGTTTAT TATTGGCGAT GGTACAAAGG TATTACTGAA GACCAGTTTA
CCTATGGGCT GTGTCACTTT TAATGAATCT TTTTTTAGTA ATTTCCCATT CCAACAATTA
GATTTTGATG ACGCTAAAGC CAAGGTAAAA GCAGTACTTG GTGAGCAACT TTCAGAGCTT
AAATCATTAG GTTGGCACTG TGTTGTTGGC GCATCGGGAA GTGTTCAGTC GGTAGTCGAA
CTCCTCAATC ATCGTAACCT TTCAGCGGTT GTTACCTTAG ATGTTTTACT GGATTTAAAG
CAGGAAATTT TAGCGCAAAA TAGTGTGTCT ATGCAGGCTA TCCCTGGTTT AAATCATGAA
AGAGCTCCCA CATTTACAGC TGGTATTTCA ATTCTGCTGG CCCTGTTTGA ATTACTTGAA
ATAGAAAAAC TTCACCTTTC AGGTGGCGCA TTACGTGAAG GGGTTTTACA AACCTTAGCC
TGTAATATTT AG
|
|---|
| Protein sequence | MKPPLYAAIT LGSNSFNMLV AKTVAQQPKV IAKYKRKVRL AEGIQADGSL SEEVLLRGLD
CLTMFAEMLR KEGISANNVA VIATATLRNI SNSDDFCRRA FPILGHPIEI ISGMREAELI
YLGMVATTAG EGRRLVIDIG GASTEFIIGD GTKVLLKTSL PMGCVTFNES FFSNFPFQQL
DFDDAKAKVK AVLGEQLSEL KSLGWHCVVG ASGSVQSVVE LLNHRNLSAV VTLDVLLDLK
QEILAQNSVS MQAIPGLNHE RAPTFTAGIS ILLALFELLE IEKLHLSGGA LREGVLQTLA
CNI
|
|---|
| |