| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0397 |
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| Symbol | rho |
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| ID | 5660797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 479324 |
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| End bp | 480589 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234931 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001500260 |
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| Protein GI | 157960226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAT CAGAATTAAA AGACACCTCG ATTTCAGATT TAGTCCAGCT TGCTCAAGAC
ATGAAGCTAG AAAATATGGC TCGTGCTCGT AAGCAAGACA TTATTTTCTC TATCCTTAAG
GCCCACGCTA AAAGCGGTGA AGATATTTTC GGTGGTGGCG TTTTAGAGAT CTTACAAGAT
GGCTTCGGCT TCCTTCGTAG CTCTGATGGT TCATACTTAG CGGGCCCAGA TGATATCTAC
GTTTCACCTA GCCAAATTCG ACGCTTTAAC ATGCGCACTG GTGACACGAT TTTCGGTAAA
ATCCGACCAC CAAAAGAAGG CGAGCGTTAT TTTGCCCTTC TAAAAGTGAC CGAAGTTAAC
TTCGACAAGC CTGAAAACTC TCGCAACAAG ATCCTATTTG AAAACTTAAC ACCTCTACAT
GCAGAAGAAC GTATGCGTAT GGAACGTGGT AATGGTTCAA CTGAAGACAT CACTTCACGT
ATTCTGGATT TATGCTCACC AATTGGTAAA GGTCAACGTG GTCTTATCGT TGCGCCACCA
AAAGCGGGTA AAACCTTATT GCTTCAAACT ATGGCGCAAA GTATCACCTA CAACAATCCA
GAAGTGGTGT TGATGGTACT ACTTATCGAC GAACGTCCTG AAGAAGTTAC CGAGATGCAA
CGTATGGTAA AAGGTGAAGT TATTGCTTCA ACTTTCGACG AGCCAGCAAG CCGTCACGTA
CAAGTTGCAG AAATGGTAAT TGAAAAGGCT AAACGTTTAG TAGAGCATAA GAAAGACGTC
GTAATCTTAC TTGATTCTAT TACTCGTCTT GCTCGTGCAT ACAACACTGT TATTCCTTCA
TCTGGCAAGG TGCTTACAGG TGGTGTTGAC GCTAACGCAC TACACCGTCC AAAGCGTTTC
TTCGGTGCAG CTCGTAACAT CGAACATGGT GGTAGCTTAA CCATTATCGC TACTGCGCTT
GTTGATACAG GCTCTAAGAT GGACGAAGTG ATTTACGAAG AATTTAAAGG TACTGGTAAC
CAAGAACTAC ACCTTTCTCG TAAAGCCGCT GAGAAGCGAG TGTTCCCTGC AATCGACTTT
AACCGCTCTG GTACCCGTCG TGAAGAGAAG CTGACTACAC CGGATGAACT ACAGAAGATG
TGGATCCTAC GTAAGATCCT TAATCCGATG GATGAAGTGA CAGGTATGGA ATTCCTTATC
GACAAGTTGG CAATGACCAA GACAAACGAT GAGTTCTTCA CTGCGATGAA GCGCGCTAAG
AGCTAA
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| Protein sequence | MNLSELKDTS ISDLVQLAQD MKLENMARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSSDG SYLAGPDDIY VSPSQIRRFN MRTGDTIFGK IRPPKEGERY FALLKVTEVN
FDKPENSRNK ILFENLTPLH AEERMRMERG NGSTEDITSR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQT MAQSITYNNP EVVLMVLLID ERPEEVTEMQ RMVKGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIEHG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTPDELQKM WILRKILNPM DEVTGMEFLI DKLAMTKTND EFFTAMKRAK
S
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