| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0396 |
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| Symbol | |
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| ID | 5660796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 478350 |
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| End bp | 479264 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234930 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500259 |
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| Protein GI | 157960225 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTA ACGATCTGAA ACTGTTTATC AGGGTTGCGG ACTGCGGTAG TTTGACTGCG
GCTGCGGTTG AATTAGACAT TTCAACTGCG GTGGCGAGCG CAGGCCTGAA GCGGCTAGAA
AAAGAGTTAG CTACGACCTT ATTCATTCGC AGCACTCGCA GCCTAAGGTT AACCGATGCC
GGCGAGCGCT ATCTTATCCA CTGCCGTCGA GCCTTAGCCG ACCTAGAGCT AGGCCATAGA
GCGATAGAAA GCAGTCAGGC GAGTATTTCA GGGCTGCTTA GCTTAGCGGT TCCTTCAGAT
ATTGGCCGTA ACGTTTTACT CCCTTGGTTA GATGAGTTCC TCGTTGAATA TTCAGAGCTT
AAGCTGCGCC TACATATTGG CGATAATCTG TCGGATTTTT ATCATGACAA GATAGATGTG
GCATTGCGCT CAGGTGTTCC TAAAGACTCT TCGCTGGTGG CCTTTAAAAT CTGTCATTCA
CGCCGGGTGC TTTGTGCTTC GCCTGACTAT ATTCGACAGT TTGGTGAACC GAGCGCTTTA
GATCAATTAC CGCAACATAA TTGCTTATTC TTTATGCTGG ATGAGCGCAC TCATGATCAG
TGGGTCTTCA ATAAAGATGG TCTGCAACAT AAGGTGAGAG TGACGGCTAA TCGTACCTGC
AATGATGCCG ATATAGCTCG GCGTTGGGCG GTTGCAGGTC AAGGGGTGGT ATTTAAGTCT
TGGTTAGATC TGACCGACGA TATCGAGTCT GGGCGATTAG TGCCTTTACT CAATGAATAT
CAAGGTGAAG AGGCCGACTT ATATTTAGTT TGCCCAGGGC GGGAGCATGT GACGCCTGTG
ATCCTGTTGC TGCGAGATAT GTTACGTGAG CGCTGTAAAC AACGTTTAGC GCGGGTGAGT
CACTTGATGG AGTGA
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| Protein sequence | MQLNDLKLFI RVADCGSLTA AAVELDISTA VASAGLKRLE KELATTLFIR STRSLRLTDA
GERYLIHCRR ALADLELGHR AIESSQASIS GLLSLAVPSD IGRNVLLPWL DEFLVEYSEL
KLRLHIGDNL SDFYHDKIDV ALRSGVPKDS SLVAFKICHS RRVLCASPDY IRQFGEPSAL
DQLPQHNCLF FMLDERTHDQ WVFNKDGLQH KVRVTANRTC NDADIARRWA VAGQGVVFKS
WLDLTDDIES GRLVPLLNEY QGEEADLYLV CPGREHVTPV ILLLRDMLRE RCKQRLARVS
HLME
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