| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0394 |
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| Symbol | |
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| ID | 5660794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 475477 |
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| End bp | 477477 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234928 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001500257 |
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| Protein GI | 157960223 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGA TATATACCGA TTCGTTAGTG ATCGGCGCTG GACTTGCTGG ATTACGAGTG
GCTATCGCGT CTAAAGAGCG TGGGCTAGAT ACTGTTGTAT TATCATTGAT CCCAGCGAAA
CGCTCGCATT CAGCGGCAGC GCAGGGGGGC ATGCAAGCAA GTTTGGGCAA TACCGTTAAA
GGTATGGGAG ATGACGAAGA TGTGCATTTC CAAGATACCG TAAAAGGATC TGACTGGGGA
TGCGATCAAG ATGTGGCACG TATGTTTGCC CACTGTGCCC CTAAAGCCGT GCGAGAATTG
GCAAACTGGG GTGTACCTTG GACGCGCATA ACCAAAGGTC CGCGTCAGGT GGTGGTTAAT
GCTGAAAAGG TGACCATTGA AGAAGCAGAA GAGGCGCATG GTTTAATTAA CGCCCGTGAC
TTTGGGGGCA CCAAAAAATG GCGCACTTGT TACACCGCTG ACGGCACAGG CCACTCGCTA
CTTTATGCGG TAGATAACAA GGCTATTTCA ATGGACATTC CAGTCCATGA GCGTATGGAG
GCGTTATCGC TTATTCATGA TGGCAAGCGT TGTCATGGTG TGGTTGCTCG CTGCCTAATT
ACTGGCGAGC TAATCGCTTA CGTTGCAAAG TCGACCACGA TTGCAACTGG TGGCTATGGT
CGTATTTATG AAGTATCGAC TAACGCCATT ATTTGTGAAG GTGTAGGCCA GGCGCTAGCA
CTTGAAACCG GTGTTGCCAA GCTAGGTAAC ATGGAAGCGG TGCAGTTCCA TCCTACGGCT
ATTGTGCCTG TCGGTATTTT GACTACTGAA GGTTGTCGTG GTGACGGCGG TTTATTGCGT
GATAAAGATG GCCATCGCTT TATGCCAGAT TACGAGCCAG AGAAGAAAGA GCTGGCATCA
CGTGACGTAG TATCGCGCCG CATGACAGAA CACATGCGCA AAGGTAAGGG CGTAGACAGT
CCTTATGGGC CGCACTTATG GCTGGATATT ACTTTGCTTG GTCGTAAACA CGTAGAAACC
AACCTACGTG AAGTAAAAGA GATCTGTGAG AACTTTCTTG GCATCGACCC AGCTAAAGAC
TGGATCCCAG TAAGACCGAC TCAGCACTAT TCTATGGGCG GTATTCGTAC CGACGCTACG
GGCCAAAGCC CACAGCTAAA AGGTTTATTC AGTGTCGGCG AAGCGGCTTG TTGGGATATG
CATGGCTTTA ACCGCTTAGG TGGTAACTCA CTCGCTGAGA CAGTAGTTGG CGGTATGATT
ATCGGTAAGT ATGTCGCCGA TTTTTGTGAA CAAAACACCC TTGAAATCGA TACCAGCTTA
GTTGAGTCCT TTGTAGGTAA ACTACAAAGC GAGATTGACG AGCTTATTGA TGGTGAAGGC
ACCGAAAATC CATTTGAGCT TAAGCAGCAG ATGCAGCAGA TCATGATGGA TTACGTGGGG
ATTTTCCGTA ATGGTCCTGA GCTTGAAAAA GCGGTTAGCG AGCTACAAGA CTTACTTAAG
CGTGCAAATG CATTAGGACT TAAGTGCAAG AAGCGGCATG CTAACCCTGA GCTTGTTGAA
GCACTGCGTG TGAAGCGTAT GCTTAAAGTG GCACTGACGG TTGCAGCTGG CGCTGCAGCA
CGTACAGAGA GCCGCGGGGC GCACGCTCGT GAAGACTTCC CACAGCGTAA CGACAAAGAC
TGGCTAAACC GCACATTATC AAGCTGGCCG GATGCTAATA GCCTGTCACC TCAACTTGAG
TATGAACAGC TAGATGTGAT GAAGATGGAG TTGCCACCAG GTTACCGTGG TTACGGTATC
GATAATGCCA TTGCGCATCC AGATACCGAA AAACGTGAGC AAGAAATTGC AGAGATTATT
AGTCAGCTTG GTCCTGATGC AGACAGGCAT CAACAACAAG CAGCAGTCAT GCCGTTTGAC
GTACCTGACT CATTAAAACC AAAGAACGAA CGTTTGAGTG ACACATTAGC GCACTCGAGC
ACAGGAGAGA TCGCTAAATG A
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| Protein sequence | MKLIYTDSLV IGAGLAGLRV AIASKERGLD TVVLSLIPAK RSHSAAAQGG MQASLGNTVK
GMGDDEDVHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL ANWGVPWTRI TKGPRQVVVN
AEKVTIEEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAVDNKAIS MDIPVHERME
ALSLIHDGKR CHGVVARCLI TGELIAYVAK STTIATGGYG RIYEVSTNAI ICEGVGQALA
LETGVAKLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGHRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHVET NLREVKEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTDAT GQSPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCE QNTLEIDTSL VESFVGKLQS EIDELIDGEG TENPFELKQQ MQQIMMDYVG
IFRNGPELEK AVSELQDLLK RANALGLKCK KRHANPELVE ALRVKRMLKV ALTVAAGAAA
RTESRGAHAR EDFPQRNDKD WLNRTLSSWP DANSLSPQLE YEQLDVMKME LPPGYRGYGI
DNAIAHPDTE KREQEIAEII SQLGPDADRH QQQAAVMPFD VPDSLKPKNE RLSDTLAHSS
TGEIAK
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