| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0386 |
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| Symbol | |
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| ID | 5660786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 464727 |
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| End bp | 465953 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234920 |
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| Product | hypothetical protein |
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| Protein accession | YP_001500249 |
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| Protein GI | 157960215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTA GCTTATTAAA TAAATTCTCC TTAGTTCACC TTGCTGTAGT AGCGGCGGTT
GCATTGATGA TTAGCGCCTC GGTTAACGCA TCACCAGAGC ACAGTCACGA AGATGCGCAT
CAAGTTGAGC AAGCAGCACA TTCAGATAAG CACTCGGATG CGGCTCATAA GGATGAGCAC
ATAGATGAAC ACGGTCATGC TGACTCTCAT GACGGCGGGC ATAAGAATGA GCATGAAGAT
GAACACGGTC ATGATGACTC TCATAACGGC GGGCATAAGG AAGGTCATAA CGACGTGCAC
GAAGATGAAC ACGGTCATGC TGGCTCTCAT AACGATGGGC ATAACGACGA GCATGGCGAT
GAGCATGCTG ATGGTCACGT CGATGAGCAT GGTGATGAAC ACGGTCATGA CGAACATGAA
GAGGGTAAGA TTCATATCAG TGCCGAGCAA ATCGTGGCGT CAGGCATAGT GACTCAGCAA
GCCCAAGCAG GTGATATCAA GCAAACACTG ACGGTATATG GCCGTACAGT GGTACCAGAG
GCGGCAAGCA GTGAAGTGCG TGCCCGCTTT GCAGGCTTAA TTACAGGCGT TAATTTTGCG
GTTGGCGATC GCGTTGAAGC TGGCCAAGTT GTTGCTGAAG TGGAGTCAAA TTCCAGCTTA
AAGCGCTATG TCATCAAGGC GCCAATCTCA GGCTTGGTAG TGGGGCGTAG TGCTAATACT
GGTGAAATGG CAGCTGACAA TGTGCTACTA CGCATTATGG ATGACAGTAA GCTTTGGGCG
CAGTATCAAA TCTTTCCGGG TCAATTAAGC AAAGTCGCCG TGGGTCAAGC AGTAACCATA
GGCTCTGAGC AACGACAAAC CGCCTCAAGC ATTAAGCATC TTCTCAATGC GCCAAACGGC
GAGACCTATA AGTTAGCCCG TGCACCACTC GATAATACAT CTGGTCAATG GGCGGTAGGC
GCTTTGCTGT CTGGCAAGCT GACATTGAGC CAGCAAGCAG TGGATTTGGT GATAGATAAC
CGCGCGCTAC AGGAGTCTGA AGGCCAACAA GTGGTGTTTA TCCGTAATGG TGAAGGCTTT
GAAAAGCGCG CAGTGACTCT TGGCCGCAGC GATAGCGAAA TGAGCCAAGT GTTGTCGGGT
CTTGAGGCGG GTGAAGAGTA CGCAGTTGAA AATAGCTTTT TGCTGAAAGC CGACCTTGAG
AAATCAAGCG CTGCACACGT TCACTAA
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| Protein sequence | MNPSLLNKFS LVHLAVVAAV ALMISASVNA SPEHSHEDAH QVEQAAHSDK HSDAAHKDEH
IDEHGHADSH DGGHKNEHED EHGHDDSHNG GHKEGHNDVH EDEHGHAGSH NDGHNDEHGD
EHADGHVDEH GDEHGHDEHE EGKIHISAEQ IVASGIVTQQ AQAGDIKQTL TVYGRTVVPE
AASSEVRARF AGLITGVNFA VGDRVEAGQV VAEVESNSSL KRYVIKAPIS GLVVGRSANT
GEMAADNVLL RIMDDSKLWA QYQIFPGQLS KVAVGQAVTI GSEQRQTASS IKHLLNAPNG
ETYKLARAPL DNTSGQWAVG ALLSGKLTLS QQAVDLVIDN RALQESEGQQ VVFIRNGEGF
EKRAVTLGRS DSEMSQVLSG LEAGEEYAVE NSFLLKADLE KSSAAHVH
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