| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0381 |
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| Symbol | |
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| ID | 5660781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 460359 |
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| End bp | 461075 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234915 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001500244 |
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| Protein GI | 157960210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCT ATATTCGACC ACAAGCTTTT GAGGCCATTA GTTTCGACTT GGACGATACC
TTATATGATA ATCGGCCCAT CATTCGAAGA GCAGAAGCCG AGATGCAGCA GTTTTTGCAT
CACGCTTATC CGAAATCGAC AAAATGGCAA TTCGATGACT GGCGTAAGCT AAAGCTTTCC
TTGTTTAGAC TGTATCCAGA GTTGCGTCAT GACACCAGCT TAGCAAGACT GGTAATGCTG
GAGCATGGCC TTAAAAAATT GGGTTATGAC GAGAAATTAG CAAAGGCAGG TGCTAATGCA
GGCCTTGAAC ACTTTGTGAA ACATCGTAGT CATTTTAAGG TCTCCGATGA GGTGGTTGAG
TTATTAACTC AGCTTAAACA GAAATATCGC TTAATCGGCA TCACCAATGG CAACGTTGAT
CATCAAGGTA TTGGCTTAGC CGAAGTATTT GAGTTTGTGC TGCACCCGGG ACAAGGTTAC
AAGCAAAAGC CATCGAGCGA TATGTTTGCG CTAGCGGCTA AGAAACTGGA TTTGCCTCTA
AGCAATATTC TTCATGTGGG CGACAGTGGC AAGAGTGACG TCGACGGGGC AAGACGAGCG
GGTTGCCAAT CTGTGTGGCT TAATCCGGGC TTTAGCGTGA CAGAGAAGTC GAGCGCTAAC
GGACAACTAC CCCATATTGA AATCGATTCG TTGCAGCAGT TAAGGCTGTT TATCTAA
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| Protein sequence | MKIYIRPQAF EAISFDLDDT LYDNRPIIRR AEAEMQQFLH HAYPKSTKWQ FDDWRKLKLS
LFRLYPELRH DTSLARLVML EHGLKKLGYD EKLAKAGANA GLEHFVKHRS HFKVSDEVVE
LLTQLKQKYR LIGITNGNVD HQGIGLAEVF EFVLHPGQGY KQKPSSDMFA LAAKKLDLPL
SNILHVGDSG KSDVDGARRA GCQSVWLNPG FSVTEKSSAN GQLPHIEIDS LQQLRLFI
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