| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0367 |
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| Symbol | |
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| ID | 5660767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 423627 |
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| End bp | 425804 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234901 |
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| Product | ABC transporter related |
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| Protein accession | YP_001500230 |
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| Protein GI | 157960196 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGCTT CAGATTCTAA GAATGCTGAG CAGTGGACGA TTTCAGCCTC TCAACGGGTG
ATGGTCGATC CTCTGCTAGA CAGTTTAGTG TTACTCACCG AGCATTTCGG TAGCCCATGT
TCCAGCGACT CGCTGGCGGC AGGCTTGCCT ATGCAGGGAC ATGTATTAAC TCCGGAGCTT
CTACCTCAAG CAGCTAGTCG TGCTGGACTG GCGGCTAAGT TGTCACGCAA GGGATTAAAC
GAAATATCCC CGATTCTGCT CCCCTGTATT TTACTTTTAA AGGATAAAAA AGCCTGCATT
CTGCGCGAGC TCGACATAGA AAAAGATCGC GCGGTAATCC AGCTACCAGA AACTGGCGGC
GAAGAAACCC TTTCGATAGA AGAGCTCGAA GCGCTCTACG TGGGCTACCT GTTCTTAGTT
AAACAGGAAT ACCGAGGTGA TATGGGCTTA GATGTTCATC TTCACGAAAG CAAAGCCCAC
TGGTTACTGC AAACCATTAA AGATTCGGCT CCCATCTACC GCGACGCCCT AATAGCTTCT
GTGCTGGTGA ACTTGTTTGC CTTGGTTTCT CCACTCTTTA TCATGAACGT ATACGATAAA
GTCGTACCAA ATCTAGCATT TGACTCTCTA TGGGTGCTAG CAATTGGTGC TGGCATTGCG
TACATTTTCG ACTTAATAAT GCGCCAGCTT CGAAGCTACC TTATCGATGT GGCAGGCAAG
AAGGTCGACA TCATTGTCTC ATCTCGACTT TTCGCTAAGG CCATCGGCAT TCCACTAGAA
AAACGTTCTC CTAGCGTAGG TGGCATGGCG AAGCAACTCG GTGAATTCGA CAGCATTCGC
GATATCCTCA CCTCCGCGAC AATAACAACT TTAGTTGATC TGCCGTTTGC ACTCTTCTTC
TTAACGATTA TCTATCTTGT CGCTGGCGAT CTCGCGCTTA TACCTTTCTT AGGTAGCATT
ATTATTATCG GCTACACCCT AATCATGCAG CCAAAACTTA AGGCTGCAAT TGACGAGAGT
AATAAATTCT CAGGCCTTAA ACACGGCCAC TTGATTGAGT CATTAGCCTC TATTGAATCA
ATAAAATCCA GTGGTGCTGA AGGCGTTGTC CAGAAAAGCT GGCAGCAGAT GATTGGTCAT
ACAGCTAACT GGCAACTGAA GTGCAAAAAA ATAACCACGT CAGTGACCAA TGTGGCGACG
TTTGTGGTGC AAACCTCTGT GATTTTTGTG GTGATTTTAG GTGTCTATCG CGTATCAGAA
AATGAAATAT CCATGGGCGG CATCATTGCG GCGGTTATTC TTTCTAGCCG CGCGATTTCC
CCCATGGCGC AACTTGCAGG CCTAATGACA CGTGGCAACC AAACTGCCAG TGCCCTGCGT
CAGCTTGATG AGCTCATGAC TCAAGAAGAT GAGTTTGAAA ACAAGGGCCA TCTCGTTAGC
CGTCAACGCT TATTAGGCCA GATCACCGCC CATCATATTG GCTTTAACTA TCCAGGATCC
GAGCGCCCCG TACTGCACCC TCTGTCACTA AACATCGCTC CCGGTGAGCG AGTAGCCATA
ATCGGTCGCA ATGGCTCAGG TAAGAGCACC CTAGCAAAAC TTTTGGTTGG CCTATTTCAG
CCCACCAAAG GAAGTTTAAC CTACGATGGT ATCGACTCGG CTCAGATCCA CCCAAGTGAT
TTAAGGCGAA ACTTCGGTTA TCTGCCGCAA GATATCACCC TGTTTCACGG TACGGTACGC
GACAATATTT TGTTTGGTAC TCGCCAAGTT ACCGAGCATC AACTGATCCG TGCGGTGCAA
CTATCCGGTG TGAACTTATT TACCAATTTA GAAACCGAAG GGTTAGATCA GCAGGTTGGC
GAAGGTGGCC GCGAGCTTTC CCGCGGCCAA CGACAAACCA TTGCCCTTGC CCGTGCAACC
TTGAATGATC CACCTGTATT GTTAATGGAT GAGCCGACAG CGAGTCTCGA TGCGCGCGCA
GAAAAGCAAT TTATCCATGC TATGCACAAT GTTAGTAAAG ACCGAACCCT GCTGCTCATC
ACCCATAAGA TGCACTTACT CAATCTTGTC GATCGTATCA TCGTCCTCGA TCGTGGTCAT
ATTGTTGCCG ATGGCCCGAA AGCTGAAGTA CTCAAGAAGC TGAATGATGG TTTATTAGCG
GGAGCAGCTA AGAAATGA
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| Protein sequence | MSASDSKNAE QWTISASQRV MVDPLLDSLV LLTEHFGSPC SSDSLAAGLP MQGHVLTPEL
LPQAASRAGL AAKLSRKGLN EISPILLPCI LLLKDKKACI LRELDIEKDR AVIQLPETGG
EETLSIEELE ALYVGYLFLV KQEYRGDMGL DVHLHESKAH WLLQTIKDSA PIYRDALIAS
VLVNLFALVS PLFIMNVYDK VVPNLAFDSL WVLAIGAGIA YIFDLIMRQL RSYLIDVAGK
KVDIIVSSRL FAKAIGIPLE KRSPSVGGMA KQLGEFDSIR DILTSATITT LVDLPFALFF
LTIIYLVAGD LALIPFLGSI IIIGYTLIMQ PKLKAAIDES NKFSGLKHGH LIESLASIES
IKSSGAEGVV QKSWQQMIGH TANWQLKCKK ITTSVTNVAT FVVQTSVIFV VILGVYRVSE
NEISMGGIIA AVILSSRAIS PMAQLAGLMT RGNQTASALR QLDELMTQED EFENKGHLVS
RQRLLGQITA HHIGFNYPGS ERPVLHPLSL NIAPGERVAI IGRNGSGKST LAKLLVGLFQ
PTKGSLTYDG IDSAQIHPSD LRRNFGYLPQ DITLFHGTVR DNILFGTRQV TEHQLIRAVQ
LSGVNLFTNL ETEGLDQQVG EGGRELSRGQ RQTIALARAT LNDPPVLLMD EPTASLDARA
EKQFIHAMHN VSKDRTLLLI THKMHLLNLV DRIIVLDRGH IVADGPKAEV LKKLNDGLLA
GAAKK
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