Gene Spea_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0363 
Symbol 
ID5660763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp419458 
End bp420165 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID641234897 
Producthypothetical protein 
Protein accessionYP_001500226 
Protein GI157960192 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.82719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGCA GGCTTTATCA ATTAAAAAAA TTACGAAAAG TCTGCCAATT AAAATTGACG 
GTATTGGCTC TGTCTGTCTC TAGTCTTTAT GCTGGACCTG TTCAAGAGTT AGATGCTGAG 
CATATTACCC AAACGATTGA ATCGCAATAT GGCGAGCGTG CAGGCAAAAG AATTAGAGCC 
TGGTTTAAGA TTTTAGATGA AGCTAAAGGC TTACAAGATA ACGATAAAAT ATTGATGGTG 
AATAACTTTT TCAACCTCTT CCATTTTGTC GATGATATAA AGCTTTGGGG AAATAAGAAT 
TATTGGGCAA CGCCCATGGA GTTTATTGGG GTCAGTGGTG GTGACTGTGA GGATTTCTCA 
ATCGCCAAAT ACTTTACCCT ACTTCAGCTC GGTGTGTCTG AAGATAAATT ACGCATAACC 
ATGGTTAAAG CTACCAGCGT AAATCAATAT CACATGGTAC TCGCCTACTA TGAGACACCC 
TCTTCTATCC CTCTTGTTTT AGATAACCTT GATAAGCAAA TTAAGCCTGC AACACAGAGA 
AAAGATCTGT TGCCTGTCTA CAGCTTTAAT GGTCGACAGT TATGGCTAAA CAAAGAAAAA 
GGACGAGGTG TTCTAGCGGG TTCTTCATCA AAACTTGCTA AATGGAATGA CCTGCAACAT 
CGCTTGGGTG TTGAGCGCCT TAACCAACCC AAGATAAAAC TGGAGTAG
 
Protein sequence
MVGRLYQLKK LRKVCQLKLT VLALSVSSLY AGPVQELDAE HITQTIESQY GERAGKRIRA 
WFKILDEAKG LQDNDKILMV NNFFNLFHFV DDIKLWGNKN YWATPMEFIG VSGGDCEDFS 
IAKYFTLLQL GVSEDKLRIT MVKATSVNQY HMVLAYYETP SSIPLVLDNL DKQIKPATQR 
KDLLPVYSFN GRQLWLNKEK GRGVLAGSSS KLAKWNDLQH RLGVERLNQP KIKLE