| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0360 |
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| Symbol | |
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| ID | 5660760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 411859 |
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| End bp | 413874 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234890 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001500223 |
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| Protein GI | 157960189 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.69251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCA ATCCCGGACA AAATGATGCC GTACACTATG TTAGTGGCCC TTGCTTAGTC
CTAGCAGGCG CTGGCAGTGG CAAGACCAGA GTGATCATTA ATAAGATCGC CTATCTGGTG
GAAAAGTGTG GCTATAAAGC ACGCAATATT GCTGCGGTTA CTTTTACAAA TAAAGCGGCA
CGCGAAATGA AAGAGCGTGT ATCACAGTCT ATGGGGCGTA AAGAGGCGCG AGGATTATGG
ATCTCAACTT TCCATACTTT AGGCTTAGAG ATTATTAAAC GCGAGCATAA AGTAGTTGGC
TTAAAGGCTG GCTTTTCGCT GTTTGATGAT CAAGATACGT TAGCGCTATT AAAGGAACTG
ACTCAGGATG AGTTAGACGA AGATAAAGAT CTGCTGAGGC TATTAGCCAC CACCATATCC
AACTGGAAAG GTGATTTAGT TATCCCTGAG CAGGCGCGTA AGATTGCCAA AGATGAACAG
CAGCAGCTGT TTGCGCTACT GTATCAGCGT TATGCTCAGC ACATGAAGGC CTATAACGCG
CTCGACTTCG ATGATTTGAT TCTATTACCG ACTCTGTTAT TGAGACAGAA CGAAGAGGTA
AGAACTCGCT GGCAGACTCG CATTCAATAT ATGCTGGTGG ATGAGTATCA AGACACTAAC
ACCAGCCAAT ATGAGATGGT TAAGTTGCTG GTGGGCGAGC GAGCTCGCTT TACCGTGGTA
GGCGATGATG ATCAGTCTAT CTATTCATGG CGTGGTGCTA AGCCACAAAA CTTGGTGCTC
TTGGGTAAAG ACTTCCCGCG ATTAAAATTG ATTAAGCTGG AGCAAAACTA TCGCTCTAGT
CAGCGCATCT TGCGCGCAGC CAACATTCTT ATTGCTAACA ATCCGCACGT ATATGAAAAG
GCTCTATTCA GTGAGCTCGC TTATGGCGAA CCTATCCGGG TGTTGATTGC TGCCAACGAG
GAGCAGGAAG CGGAGCGAGT CGTCGCCGAG ATGATCCGTC ACAAGTTCGT TGGTAGGACC
TCATATGGGG ATTATGCGAT TCTGTATCGC GGTAACCATC AGTCGCGTCT ACTCGAGCGT
GCATTGATGA CTAACCGTAT TCCTTACAAA CTCAGTGGTG GCACCTCTTT CTTTGGTCGT
GCCGAAATCA AAGACATCAT GGCTTACCTG CGTTTGGTGG TTAACCCCGA TGATGATAAT
GCTTTCTTGC GCATTGTTAA CTTGCCTAAG CGAGGGATTG GTCCAGCAAC GCTTGAGCGT
CTAGGTAATT TTGCCAATAA GAAGCAGATC TCGATGTTCG CTGCTATTTT TGAGGCCGAC
TTAAATCATG AATTACCGCC TGCTGCCATG TCGTCTCTGT ATCAGTTTGG TCGTTTCGTG
GTTGAAATGG GTGACTGTGC CGAACGTGGC GATCCCGTCG AAGCTGTTAA GCAGTTAATT
CGAAAGATTA ATTACGAAGA CTACCTATAC GAGACCAGTA CTAGCGCAAA AGCGGCTGAA
ATGCGCATGA AGAACATTTC TGAGCTTTAC CGCTGGGTAA CAGAGATGCT GCAAGGCGAC
GATTTAGATG AAGGTATGAC ATTACCTGAG GTGGTTACTC GTCTTACCCT GCGCGACATG
ATGGAGCGTA ATAACGAAGA TGAGGGCGGC GATCAGGTTC AACTTATGAC CTTACACGCC
TCTAAGGGAC TGGAATTTCC TTATGTGTTT ATGGTGGGCG CCGAAGAGCG AATTTTGCCT
CACCAAAGCA GTATCGATGA AGATAACGTC GATGAAGAGC GTCGTCTGGC ATATGTGGGG
ATCACCCGTG CACAAAGAGA GTTGTGGTTT GTGATTTGTC GGGAGCGTCG CCAGTTTGGT
GAAACCATTC GTTGTGAGCC GAGTCGCTTC TTGATGGAAC TTCCTCAAGA TGATCTCATT
TGGGAAAACC GTAAACCGGT GCAAACTGTA GAGCAGCGTC AGCAGTCTGG GAAAACGAAT
ATCGCCAACA TAAGAGATAT GTTCAAGAAT AAGTAG
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| Protein sequence | MKLNPGQNDA VHYVSGPCLV LAGAGSGKTR VIINKIAYLV EKCGYKARNI AAVTFTNKAA
REMKERVSQS MGRKEARGLW ISTFHTLGLE IIKREHKVVG LKAGFSLFDD QDTLALLKEL
TQDELDEDKD LLRLLATTIS NWKGDLVIPE QARKIAKDEQ QQLFALLYQR YAQHMKAYNA
LDFDDLILLP TLLLRQNEEV RTRWQTRIQY MLVDEYQDTN TSQYEMVKLL VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGKDFPRLKL IKLEQNYRSS QRILRAANIL IANNPHVYEK
ALFSELAYGE PIRVLIAANE EQEAERVVAE MIRHKFVGRT SYGDYAILYR GNHQSRLLER
ALMTNRIPYK LSGGTSFFGR AEIKDIMAYL RLVVNPDDDN AFLRIVNLPK RGIGPATLER
LGNFANKKQI SMFAAIFEAD LNHELPPAAM SSLYQFGRFV VEMGDCAERG DPVEAVKQLI
RKINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLQGD DLDEGMTLPE VVTRLTLRDM
MERNNEDEGG DQVQLMTLHA SKGLEFPYVF MVGAEERILP HQSSIDEDNV DEERRLAYVG
ITRAQRELWF VICRERRQFG ETIRCEPSRF LMELPQDDLI WENRKPVQTV EQRQQSGKTN
IANIRDMFKN K
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