| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0358 |
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| Symbol | |
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| ID | 5660758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 409908 |
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| End bp | 411026 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234888 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001500221 |
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| Protein GI | 157960187 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGACCCTGGT GATGATCATC ATTGCAGTAC TGGCTTTTGG CTCAGTCATT
GGCTTTAATC TTTTTATTAA AGGAAAAATT GCCGATGCAA TTGCCAATAT GCCTGAAGCT
GTGGCTCCCG TCACGGCTAT CGATATTAAA GAGAGCAAGT GGCAACCAAC GATTAACGCG
ATTGGATTTG TAGAACCTAA TCAAGGCGTA TCCATAGCTA ATGAAGTTGC TGGTGTGGTA
TCCGCGATTC GTTTTGAAAA CGGCAGTCAG GTCCAAGCGG GTCAAATGCT TGTTGAGTTA
GACTCGAAAG TAGAGAAAGC CAATCTTAAG AGCAAGCAGG TGCAGCTACC CGCTGCTGAG
GCGGACTATA AACGCCTAAG TAAACTCTAC AAGCAAAACT CCATCTCTAA GCAAGATCTC
GATAATAGTC AGTCTAAGTA TTTAGCTTTA ATGGCTGACA TTGAAAGCTT GAGTGCCACC
ATAGATCGTC GTGAGATAAA AGCGGCTTTT ACGGGTCTAG TCGGTATTCG TAACGTCAAC
TTAGGTGAGT ATCTGCAAAC AGGTACGGAT ATCGTCCGTC TCGAAGATAT CAGCACCATG
AAGATCCGCT TTACTATTCC GCAAACCCAG CTTCCTCGAA TAGAAACAGG CCAAGTTGTC
CATGTCCATG TAGACGCCTA CCCTACCGAG CCATTTGAAG GGACGATTTC GGCAATTGAA
CCCGCCGTTT TCTATCAAAG CGGTTTGATT CAGGTACAAG CCCTGATCCC AAATTCCCAC
GGTAAGCTAC GTAGCGGTAT GTTCGCCAAG GTCGATATTA TGTTGCCGGA GTTAACCCAA
CAGGTGGTGT TACCACAAAC CGCGATTAGC TTTACCCTTT ACGGCGACTC TGTCTATGTC
ATTGAAGAGA AAAACGAAGA TGGCGAGCAA GTAAAGCGTG TTAAGCAGGT GAATGTAAAA
GTCCTTGAGC GCGATGACAT CAACGCACTC ATCACTGGTG GCGTGAATGC TGGCGATACT
ATCGTCACCT CAGGTCAAGT ACGCTTAAGT AACAACACTA AAGTCAAAGT GACAGAGGAT
GATGCACTAA CCCCTCCAGC CACATTGCCA CAGTTGTAA
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| Protein sequence | MKKWTLVMII IAVLAFGSVI GFNLFIKGKI ADAIANMPEA VAPVTAIDIK ESKWQPTINA
IGFVEPNQGV SIANEVAGVV SAIRFENGSQ VQAGQMLVEL DSKVEKANLK SKQVQLPAAE
ADYKRLSKLY KQNSISKQDL DNSQSKYLAL MADIESLSAT IDRREIKAAF TGLVGIRNVN
LGEYLQTGTD IVRLEDISTM KIRFTIPQTQ LPRIETGQVV HVHVDAYPTE PFEGTISAIE
PAVFYQSGLI QVQALIPNSH GKLRSGMFAK VDIMLPELTQ QVVLPQTAIS FTLYGDSVYV
IEEKNEDGEQ VKRVKQVNVK VLERDDINAL ITGGVNAGDT IVTSGQVRLS NNTKVKVTED
DALTPPATLP QL
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