Gene Spea_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0355 
Symbol 
ID5660755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp405421 
End bp406278 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content45% 
IMG OID641234885 
Producthypothetical protein 
Protein accessionYP_001500218 
Protein GI157960184 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA TACTAAAACA CTTGTCCGTT GCTAGCAGTG TTGTGATCGC GCGGATCTTG 
TTAGCGAGCT TTTTATTGCT GACGGCAATA CCTAGATTTA CTGCAAATGA TTCAAGCTAT
TTCACTAAGC AACTCATGGA GATCGGTCTG GCTGATCTAC CTTGGCTTAG TCCTGCAATT
GGTATTGTGC AACTACTGAC GGCACTTGCG CTGCTTAAGC CGCAAAATAG CTGGGCGCAG
TTAATGATTT ACCTTTACGC TGGGCTCGCC ATTGTGCCGT TATTAATGCT GTTTACTCAC
CCTGTATGGC TGGATAGTTT AGGCGGCTTC CCTGCAATTG GCGCTGGGCA GGGCCTTATT
AAGTACTTAG GGATCTCGGC TTTAGCGCTA TTTATAGCTT CTTATTATGG CGGCAAACAA
GCGCTCAATG CTATGGCAGA AAAATCGATG CTAGCTGGGA TTGTAATGGT AATGGCATGG
ATTGGCGGCA TGAAGTTTAC CCAGTATGAA GCCGACGGTA TTGAAGGCCT AATGAGTACT
AGCCCGTTGT TTAGTTGGAT ATACGATATC TTTAGTGTAT TGCACGGCTC GTATTTTATT
GGCGTGATAG AGCTCGTTGC TGTGGCTGGT ATTGTGTTAG CCTCATGGTC GAATAAAGCC
TATGGTTTAG GCCTTACCAT TGCAGCGTTA ACCTTTGCCG CAACGCAAAC TTTCTTAGTC
ACCTTACCCG CTTATGAAAC CAGTTCAACA GTGCCGATGC TTACGGAAAG TGGTCAGTTT
ATTGTGAAAG ATTTAGCGTT ATTGGCCTGT AGTATTTTAC TATTTGCCAA AATGCTGGAG
GAAAATAAAC GCATATAA
 
Protein sequence
MSNILKHLSV ASSVVIARIL LASFLLLTAI PRFTANDSSY FTKQLMEIGL ADLPWLSPAI 
GIVQLLTALA LLKPQNSWAQ LMIYLYAGLA IVPLLMLFTH PVWLDSLGGF PAIGAGQGLI
KYLGISALAL FIASYYGGKQ ALNAMAEKSM LAGIVMVMAW IGGMKFTQYE ADGIEGLMST
SPLFSWIYDI FSVLHGSYFI GVIELVAVAG IVLASWSNKA YGLGLTIAAL TFAATQTFLV
TLPAYETSST VPMLTESGQF IVKDLALLAC SILLFAKMLE ENKRI