| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0343 |
|---|
| Symbol | |
|---|
| ID | 5660743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 388225 |
|---|
| End bp | 389097 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641234873 |
|---|
| Product | DNA-binding transcriptional regulator IlvY |
|---|
| Protein accession | YP_001500206 |
|---|
| Protein GI | 157960172 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATATCC GCACTATCAA GCTTTATCTG CATTTAGCAG ACAGTTTGCA CTTTGCTAGA
ACAGCACAGG CGATGCATGT CAGTCCATCG ACCTTGAGCC GGACCATGCA GAGGCTGGAA
GAGGAGGTTG GCGCGCAGCT GTTTCAACGT GACAACCGCA GCGTGACCTT GACCAGCGCC
GGAGTCGAGT ACCGACACTT TGCCGAGTCC ACACTTGAGC AGTGGGGAAA GCTGAAAACC
AAGCTAGATC CTAAGCAGGA CTTTCTAAGA GGACGGCTCA ACCTGTACTG CTCGGTAACC
GCCGCCTACA GTCACCTCCC AGGATTGTTG GATCGTTTTA GACGTGAGCA TCCATTAGTA
GAAATCGCCC TCACCACGGG TGATGCAGCC AATGCGGTGA ATGAAGTACG CAACAATCGC
GCCGATATTG CCATCGCCGC CCTACCCGAT CCGTTTCCCG ATAACCTGCA TTTTGCAAAA
ATAGATGATG TGCCGCTATC GATCATTGCG CCGACGTTTA GGTGTCAGGT GCAAGAGCTG
CTTACTGAGT CTTATATTCC ATGGGATAGA CTGCCCTTTA TCGTGCCGGA GCACGGTCCG
GGTCGAAAAC GTATCGATAA CTGGTTTAAG TCATTGGGAT TAATTCCCAA TATTTATGCG
CAAGTGTCTG GCCAAGAAGC CATAACCTCT ATGGTGGCAT TGGGCTGCGG CGTGAGCATT
ACCCCAGAGG TGGTGATTAA TAACAGCCCA GTACGAGATC GCATTCAGCT ACTCACATCG
CCTATCGACA TTCCGCCGTT TGAACTCGGC TGTTGTTGTA AGAGCAAACG CCTAGCCGAA
CCTGTTATAG AGGCATTTCT GCAGGCGATT TAA
|
|---|
| Protein sequence | MDIRTIKLYL HLADSLHFAR TAQAMHVSPS TLSRTMQRLE EEVGAQLFQR DNRSVTLTSA
GVEYRHFAES TLEQWGKLKT KLDPKQDFLR GRLNLYCSVT AAYSHLPGLL DRFRREHPLV
EIALTTGDAA NAVNEVRNNR ADIAIAALPD PFPDNLHFAK IDDVPLSIIA PTFRCQVQEL
LTESYIPWDR LPFIVPEHGP GRKRIDNWFK SLGLIPNIYA QVSGQEAITS MVALGCGVSI
TPEVVINNSP VRDRIQLLTS PIDIPPFELG CCCKSKRLAE PVIEAFLQAI
|
|---|
| |