Gene Spea_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0335 
Symbol 
ID5660735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp378094 
End bp378762 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID641234865 
Producttwo component transcriptional regulator 
Protein accessionYP_001500198 
Protein GI157960164 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000018466 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGC TAATTGTTGA TGACAGCCAT AACCTAAGTG AAACAATCGC CGACTATTTG 
GAACTCGAAG GCATGATTAT CGACTGCGCC TATCACGGTG AGGCCGCGAT TAATTTAGTC
TCCGAAAATA GTTACGATGT CATCATTATG GATATCATGA TGCCAAAGAT TGACGGCATC
ACCGCAGTAC GCAAGCTCCG TGAAGAGCTG TATTGCAACA CGCCTATTTT ATTTCTCACC
GCCAAAGACA GCCTCGACGA CAAAGTCGCC GCCTTCAAGG CCGGTGGCGA TGACTACCTG
CTCAAGCCCT TCGCCATGGA GGAGCTGAGT CTGCGTCTAC ATGCACTGAG TAATCGCGGA
CCAAGGCAAG ATATCGGCAC CTTGTCCTTT GCCGATATCA AGATTAATAC TCAGACCGAT
GTTGTGACAC GAGGCGAGCA ACCAATTAAG CTCAGCCGTA TCCAGCTAAA AATATTAAAG
GTGTTGCTCA AGCGTGCGCC GAGTATTGTC AGCCGCCAAG ATGTAACAGA TGCAGTCTGG
GGGGATGAGT CTCCTCCGAG TGATGCCTTG CGTAGTCATA TTTACGGCCT GCGAACCGCC
CTTGACAAAG GCTTCGAACA ATCACGATTA GAGACGATTC ATGGACAAGG TTACCGCCTC
AAAGCATAA
 
Protein sequence
MKVLIVDDSH NLSETIADYL ELEGMIIDCA YHGEAAINLV SENSYDVIIM DIMMPKIDGI 
TAVRKLREEL YCNTPILFLT AKDSLDDKVA AFKAGGDDYL LKPFAMEELS LRLHALSNRG
PRQDIGTLSF ADIKINTQTD VVTRGEQPIK LSRIQLKILK VLLKRAPSIV SRQDVTDAVW
GDESPPSDAL RSHIYGLRTA LDKGFEQSRL ETIHGQGYRL KA