Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0308 |
Symbol | |
ID | 5660708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 346748 |
End bp | 348199 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641234838 |
Product | hypothetical protein |
Protein accession | YP_001500171 |
Protein GI | 157960137 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0254223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTAA AACAAGACTT TTTTGAACAG CTTCCCGAAT TCTATTCGCA AGTCTTTCCA TTAGGCATTA GCAATCCCCA CTGGCTGGCT TGGAGCCAAG ATGCGGCGGA TCTCATCGAG ATAAAACAGC CCAGTGATGA GCTACTACAG GGGCTTTCAG GCAATGCACA TGTCGATGGC GCAAGTTATT ATGCACAGGT CTACAGCGGC CACCAGTTTG GTGGTTACTC TCCTCAACTT GGCGATGGTC GCTCGATTAT TCTGGGCGAG GCTTTAGGCC CGCAAGGAGC CTGGGATGTG GCGCTAAAAG GTGCTGGTCC CACACCATAT TCGCGCCATG GTGATGGCCG CGCAGTGATG CGCTCAGCCG TGCGGGAGTT TTTAATTTCA GAAGCCTTGC ATCACCTGCA TATTCCCACT ACCCGAGCAT TAGCGGTTAT TGGATCAGAC CTGCCCGTAT GGCGTGAATC CCAAGAAACT GCGGCGATAA CGGTGCGGTT AGCCAAGAGC CATATTCGTT TCGGCCACTT TGAGTATTTT TGCCACAGCG AGCGAGGGGC ACCGGCAAAG CTGAAGCAAT TACTGGATTT CACCATCAAG CAGCACTATC CAGATTTAAG TTGCGATGCG GTGGGTTACA AGGCTTGGTT TACTCGCGTG GTTGCCGATA CTGCTAAGAT GATTGCTAAC TGGCAGGCGA TAGGCTTTGC CCACGGAGTG ATGAACACAG ATAATATGTC GATTCTGGGT GACACATTCG ATTTCGGTCC ATTTGCCTTT TTAGATACCT TCAAGGAAGG CTTTATCTGT AATCATTCCG ATCCTGAGGG GCGTTACGCT TTTGGCCAGC AGCCGGGAAT TGGTCTTTGG AACTTACAAC GTTTAGCCCA GGCGCTATCG CCCATCATAG CTTCAGACGA CTTGATTGAG TCGCTGAATC AATATCAAGT AGAGCTAGTT AAGCACTATC TACTGCTGAT GCGCGGCAAG TTGGGGTTAA AGACTTCTGC TGCGGAAGCC GAACAAGACG ACCATGATTT AGCACTGATT GGCGCCTTTA CTGGCTTAAT GGAGCGAAAT CAGTTGGATC ACACTAATAC TTGGCGTCGA TTCGGTCAGC TAGACCCCAA CGCTAGTCAC TCCTCTTTGC GGGATGATTT TGTCGATCTT CATGGTTTCG ATACTTGGTA TCAGGCATAC CAGGTTCGAC TCGGAAGCGT TGACGAAGTT GGCCTGTGGC AGAAAGAGCG TAACCAAGTA AATCCTAAAT ATATTTTGCG TAATTACCTT GCTCAAGAGG CAATAATTGC TGTCGAGCTG GGCGATCTTA AGCCGCTGCA TAATCTACAG CGCTTATTGC AGAACCCATT TGATGAGCAG TTAGAATTTG AAGACATGGC CAAGCGACCA CCGGATTGGG GCCAAGGCTT AATCATGTCA TGCAGTAGCT AA
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Protein sequence | MRLKQDFFEQ LPEFYSQVFP LGISNPHWLA WSQDAADLIE IKQPSDELLQ GLSGNAHVDG ASYYAQVYSG HQFGGYSPQL GDGRSIILGE ALGPQGAWDV ALKGAGPTPY SRHGDGRAVM RSAVREFLIS EALHHLHIPT TRALAVIGSD LPVWRESQET AAITVRLAKS HIRFGHFEYF CHSERGAPAK LKQLLDFTIK QHYPDLSCDA VGYKAWFTRV VADTAKMIAN WQAIGFAHGV MNTDNMSILG DTFDFGPFAF LDTFKEGFIC NHSDPEGRYA FGQQPGIGLW NLQRLAQALS PIIASDDLIE SLNQYQVELV KHYLLLMRGK LGLKTSAAEA EQDDHDLALI GAFTGLMERN QLDHTNTWRR FGQLDPNASH SSLRDDFVDL HGFDTWYQAY QVRLGSVDEV GLWQKERNQV NPKYILRNYL AQEAIIAVEL GDLKPLHNLQ RLLQNPFDEQ LEFEDMAKRP PDWGQGLIMS CSS
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