Gene Spea_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0308 
Symbol 
ID5660708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp346748 
End bp348199 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content49% 
IMG OID641234838 
Producthypothetical protein 
Protein accessionYP_001500171 
Protein GI157960137 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0254223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAA AACAAGACTT TTTTGAACAG CTTCCCGAAT TCTATTCGCA AGTCTTTCCA 
TTAGGCATTA GCAATCCCCA CTGGCTGGCT TGGAGCCAAG ATGCGGCGGA TCTCATCGAG
ATAAAACAGC CCAGTGATGA GCTACTACAG GGGCTTTCAG GCAATGCACA TGTCGATGGC
GCAAGTTATT ATGCACAGGT CTACAGCGGC CACCAGTTTG GTGGTTACTC TCCTCAACTT
GGCGATGGTC GCTCGATTAT TCTGGGCGAG GCTTTAGGCC CGCAAGGAGC CTGGGATGTG
GCGCTAAAAG GTGCTGGTCC CACACCATAT TCGCGCCATG GTGATGGCCG CGCAGTGATG
CGCTCAGCCG TGCGGGAGTT TTTAATTTCA GAAGCCTTGC ATCACCTGCA TATTCCCACT
ACCCGAGCAT TAGCGGTTAT TGGATCAGAC CTGCCCGTAT GGCGTGAATC CCAAGAAACT
GCGGCGATAA CGGTGCGGTT AGCCAAGAGC CATATTCGTT TCGGCCACTT TGAGTATTTT
TGCCACAGCG AGCGAGGGGC ACCGGCAAAG CTGAAGCAAT TACTGGATTT CACCATCAAG
CAGCACTATC CAGATTTAAG TTGCGATGCG GTGGGTTACA AGGCTTGGTT TACTCGCGTG
GTTGCCGATA CTGCTAAGAT GATTGCTAAC TGGCAGGCGA TAGGCTTTGC CCACGGAGTG
ATGAACACAG ATAATATGTC GATTCTGGGT GACACATTCG ATTTCGGTCC ATTTGCCTTT
TTAGATACCT TCAAGGAAGG CTTTATCTGT AATCATTCCG ATCCTGAGGG GCGTTACGCT
TTTGGCCAGC AGCCGGGAAT TGGTCTTTGG AACTTACAAC GTTTAGCCCA GGCGCTATCG
CCCATCATAG CTTCAGACGA CTTGATTGAG TCGCTGAATC AATATCAAGT AGAGCTAGTT
AAGCACTATC TACTGCTGAT GCGCGGCAAG TTGGGGTTAA AGACTTCTGC TGCGGAAGCC
GAACAAGACG ACCATGATTT AGCACTGATT GGCGCCTTTA CTGGCTTAAT GGAGCGAAAT
CAGTTGGATC ACACTAATAC TTGGCGTCGA TTCGGTCAGC TAGACCCCAA CGCTAGTCAC
TCCTCTTTGC GGGATGATTT TGTCGATCTT CATGGTTTCG ATACTTGGTA TCAGGCATAC
CAGGTTCGAC TCGGAAGCGT TGACGAAGTT GGCCTGTGGC AGAAAGAGCG TAACCAAGTA
AATCCTAAAT ATATTTTGCG TAATTACCTT GCTCAAGAGG CAATAATTGC TGTCGAGCTG
GGCGATCTTA AGCCGCTGCA TAATCTACAG CGCTTATTGC AGAACCCATT TGATGAGCAG
TTAGAATTTG AAGACATGGC CAAGCGACCA CCGGATTGGG GCCAAGGCTT AATCATGTCA
TGCAGTAGCT AA
 
Protein sequence
MRLKQDFFEQ LPEFYSQVFP LGISNPHWLA WSQDAADLIE IKQPSDELLQ GLSGNAHVDG 
ASYYAQVYSG HQFGGYSPQL GDGRSIILGE ALGPQGAWDV ALKGAGPTPY SRHGDGRAVM
RSAVREFLIS EALHHLHIPT TRALAVIGSD LPVWRESQET AAITVRLAKS HIRFGHFEYF
CHSERGAPAK LKQLLDFTIK QHYPDLSCDA VGYKAWFTRV VADTAKMIAN WQAIGFAHGV
MNTDNMSILG DTFDFGPFAF LDTFKEGFIC NHSDPEGRYA FGQQPGIGLW NLQRLAQALS
PIIASDDLIE SLNQYQVELV KHYLLLMRGK LGLKTSAAEA EQDDHDLALI GAFTGLMERN
QLDHTNTWRR FGQLDPNASH SSLRDDFVDL HGFDTWYQAY QVRLGSVDEV GLWQKERNQV
NPKYILRNYL AQEAIIAVEL GDLKPLHNLQ RLLQNPFDEQ LEFEDMAKRP PDWGQGLIMS
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