| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0304 |
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| Symbol | |
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| ID | 5660704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 340442 |
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| End bp | 343084 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234834 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500167 |
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| Protein GI | 157960133 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATA TTAATAAGAA AGCCTTTTTG AAGATAACGG GCATAGGCCG AGCTGTTTTT
AAGAAAAGCT TAATGACAAT CAGTATCTTG CTATTGAACT TGGTGGTGCC CGCTTTTGCT
ACGCCTGAGT TGGATGATGA AGTGATTACC GAGCGATCAA TTGAAAGAAT TGAAGTGCGT
GGGATCCGAA CCTCGATGAA GGACTCCATT AATAGCAAAC GATTCTCGGA TGCTGTGGTC
GATGCGGTTA CAGCTGAAGA TATAGGTAAG TTCCCAGACA GCGATGTTGG CGAGTCACTC
GGACGCATTC CCGGGGTTGC GGTTAACCGT CAATTTGGTC AAGGTCAGCA GGTTTCTATT
CGAGGTGCAT CCAATCAGCT AACCAGTACC TTGTTAAATG GGCACTCGGT CGCATCTACC
GGTTGGTTTG ATCAGCAAAC AACTGACCGT AGCTTTAACT ACTCACTACT GCCACCCGAA
ATGGTGGGGG ATATTGAGGT TTATAAATCT TCACAAGCCG ATATTACCGA AGGTGGGGTG
GGTGGAACCG TTATTATTAA TACCCGTAAA CCATTCGAGT TAGATGCCAA CTCACTTTTT
TTCAGTCATA AGCAAGACTA TGGCAGCGTC TCAGAGGAGA TTGACCCTGA GTTTTCGGGA
TTATATAGCT GGAAAAATAG TGCAGAAAGT GTCGGTATCC TACTTGCTGT TGCCGATGGC
AAGACGCACT ACCAGCGAAA TGGTATTGAA TCAAACATAG GTTGGGGGGA TATCGTACCA
ACGACATTCG AGCAACAGCG CGAGCGCACG GCGATTAACG CTGTTTTGCA ATATCGCCCA
ACAGATAATG TAGAGCTTGG CTTCAATATG ATGCATCTCG ATATGCAAGC AAACAATGCC
AACACTTCGC TGTTTCTTAT GTTCCCTGAT GATAAGGAAG CAGCCTGTGA ACAAAGGAAC
CAAGCGGGTA CTTGCATCTT CTACCGTCGT GACGCTAATG ATGCTAATCC TGGGTGGGCG
CAAACATGGG TACGCGAAGC CAGTATGGAT TCAAAGACCT TTGATTTAGA TTTTACTTAC
GAAGCGGATA ACTACACCTT AGAGGGGCTA GTGGGTAACA CTAAGTCTGA AGGGGGCACC
AATACGACCG CTAACTACGG TGCCTGGTTA GGTCAAGCGC GTGATTTTGC AGGTACTTAC
GATGCCACCG GCGATGTGAT CGACATTGAC ATTGCCAACC CGTCATTTGG GGTTGAAGAC
TTCAATGGTC CTCTTGCACC TGAAGCTTGG TCTCTGCGTA AACAACCTAA TTCAGATGAA
GAAACATATA TTAAGTTTGA TATTGATTTT CCAGTCGACT ACGGCTTCAT CACGGCAATA
AAAACAGGTG TCAGCTGGGC AAATCATGAC GTTAAACAGG AGTCTTTCGA GGGGATAGCA
AGCCCCAATG TCATCGCTAA AGATGCATCA GCCTATTACT CGGGGAGCGT TTCATCTGGT
GGTGGATTTA CTCTACCAAA ACCTATTCTT GATGCCATGT TAAATGATGC CAAGGCCGCG
ATAACGCATT TTGATCGCGA CGGCCAAGTC TATAAATCTG GTTACGGTAC GATTAATGAA
GAAAACTTAG CCTTGTATCT TATGGCTAAC TTCGCGTCTG AGCGTATTAG AGGTAATGTC
GGGCTGCGCT TTATATCAAC TGATGCTGAG TCTGATTTTT ACCAGCTTAA ACCCGATGGT
TCTTACGCCG ATGAGTTGAG CACCTTAACA GCAAGTTATA GCGATTTATT ACCTAGTATC
AACCTTGCAT TTGATCTTGC TCCAGATATC ATCATTCGTG CTTCGGCATC TAAGGTCATT
TCTCGTCCCA ATTACGATGA TATGTTTTCT GCCTCTGCAC TTTCAGGTTA CGCCGATGGC
ATTCCAGATA ACGAGGTGCT TGATAGGGGG AATATTGCAC TGACCCCATT TAAGGCCACT
CAAGCGGATC TTGGTATTGA GTGGTATTTC GCTGCAGAAG GTTTGCTCTC TGCGACTTAC
TTTATTAAAG ATATCGGCTC CTTCATCACT TCTGAGCAAT TATTGGATCA AAGTATAGGT
ATTATCGATC CTGACTCCGG TGAGGATAGC TGGACAGTAT CGACCAAGAA AAATGGTTCG
GGTGGTCAGA TCCAAGGGCT TGAGCTACAG CTACAGAACG GCTTCGAAAA TGGCCTAGGT
TACGCTGTAA ATTATACCTT TGCCGACTCA AACGCCCCTG CTGGTCATTA CCCAGATCAA
GTCAGCGTAT TTTCCGACTC ATCTAAACAT ACGGTGAACT TAGTTGGTTA CTATGAAATG
GATAGCTTCT CTGCTCGTCT TGCCTACAAT TGGCGCAGCG AATACATGAT CCGCGAATTG
CCCGGCTACT ATGGTAATCG TGAGCATCAA GCTTACGGCA CGGTCGACTT AAGCAGTCGC
TACAACATCA CTGAACATCT CGCTATTTCT TTCGAGGTGG TGAACTTATT GGCAGAAGAC
AGTATTCAGC TGGGTGTCGC AGCTGATTCA GCAGAAGTGA AACCGGAGCT GCAGAATAAC
TACCCAGTAT TTAGTGCTGA AGGTGAGGCG CGTTATAAAC TCGGTATTAC AGTCCGATTT
TAA
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| Protein sequence | MMDINKKAFL KITGIGRAVF KKSLMTISIL LLNLVVPAFA TPELDDEVIT ERSIERIEVR
GIRTSMKDSI NSKRFSDAVV DAVTAEDIGK FPDSDVGESL GRIPGVAVNR QFGQGQQVSI
RGASNQLTST LLNGHSVAST GWFDQQTTDR SFNYSLLPPE MVGDIEVYKS SQADITEGGV
GGTVIINTRK PFELDANSLF FSHKQDYGSV SEEIDPEFSG LYSWKNSAES VGILLAVADG
KTHYQRNGIE SNIGWGDIVP TTFEQQRERT AINAVLQYRP TDNVELGFNM MHLDMQANNA
NTSLFLMFPD DKEAACEQRN QAGTCIFYRR DANDANPGWA QTWVREASMD SKTFDLDFTY
EADNYTLEGL VGNTKSEGGT NTTANYGAWL GQARDFAGTY DATGDVIDID IANPSFGVED
FNGPLAPEAW SLRKQPNSDE ETYIKFDIDF PVDYGFITAI KTGVSWANHD VKQESFEGIA
SPNVIAKDAS AYYSGSVSSG GGFTLPKPIL DAMLNDAKAA ITHFDRDGQV YKSGYGTINE
ENLALYLMAN FASERIRGNV GLRFISTDAE SDFYQLKPDG SYADELSTLT ASYSDLLPSI
NLAFDLAPDI IIRASASKVI SRPNYDDMFS ASALSGYADG IPDNEVLDRG NIALTPFKAT
QADLGIEWYF AAEGLLSATY FIKDIGSFIT SEQLLDQSIG IIDPDSGEDS WTVSTKKNGS
GGQIQGLELQ LQNGFENGLG YAVNYTFADS NAPAGHYPDQ VSVFSDSSKH TVNLVGYYEM
DSFSARLAYN WRSEYMIREL PGYYGNREHQ AYGTVDLSSR YNITEHLAIS FEVVNLLAED
SIQLGVAADS AEVKPELQNN YPVFSAEGEA RYKLGITVRF
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