Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0288 |
Symbol | |
ID | 5660688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 323371 |
End bp | 324408 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641234818 |
Product | hypothetical protein |
Protein accession | YP_001500151 |
Protein GI | 157960117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTTC GTCGAGTTTT TTTTATCACA CTATCATCCC TGCTATGTAC GCCTGCAATG GCGAGTATTG AATTGACGGA AAATATACGG TTAGGTGGAT TCGGTTCAAC CTCCATTAGT CAGAGTGACA ACCGCACTCC GTTATTCATA AGTCGAGAAA TTACCGATGA GACTTGTTAT GACTGTGACA CCACCTTTGG TTTACAGTTA GATGTGGGCA TCGCCGAGGG ATTTGGGGCA TCAGGACAAG TGGTAAAGCG AACTCAGGAT AGCTGGAGTG ATCCAGAGCT TGAGTGGGCT TATTTATTCT ACGAGTTTGA TGACTTTGAA GTGAGGGCTG GTCGTCTACG CTTACCGTTA TTTTTAGCTT CTGAATATTA CTATGTTGGC CAAGCTTACC CGTGGATAAG GCCGCCTCAA GAAGTTTATG ACAGCATTCT AGGCTTCACT TTTTATGATG GACTGTCTCT TTCTTGGGAT TATGAAATTT CTGATGAACT ACAGCTTACG GTTTCCCCAT ATTATGGATT TGACCGCCTA AATAAGGTCG AGTTAGGCGA GTTTTTATTA CAGTTTGATA CCGAATATAT GGCGGGGATC TACGTCGATT TGACCGGGTT TAATTACCGC ATCCATAGCG GTTTTATGCA GGCTAAATAT GCTCAGCGTC CTTTTAATAC CACACAAAAA TTAGATATTT ATACCTTAGG TGCCGAGTAC AGTTATGAGT CGTGGCAGTT TATGGCAGAA ACTGAGATTG ACCGGCTACA GGCCAATTGG TATGCCTCTG TGATTTACGC CTTTGACGAC TTATCTCCTT ATATTACCTA TGCGGAAAGC CATCAGCTGC GTAAATCAAA AGGGGTGACG GCTGGGGTTA GGTATGACGT GACTTCCAGT ATTTCGTTAA ATGCAGAGTA TCAGATGATT TTCTCCCAAG AGGAGGGCAA TAGGGCGCAG TTTGTCACCT CTCCTTTAGT GTATGGCGAA AGTGCAGATG TAGACCTGAT GACTCTAAGC GTCAGTTTTG TCTTTTAA
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Protein sequence | MLFRRVFFIT LSSLLCTPAM ASIELTENIR LGGFGSTSIS QSDNRTPLFI SREITDETCY DCDTTFGLQL DVGIAEGFGA SGQVVKRTQD SWSDPELEWA YLFYEFDDFE VRAGRLRLPL FLASEYYYVG QAYPWIRPPQ EVYDSILGFT FYDGLSLSWD YEISDELQLT VSPYYGFDRL NKVELGEFLL QFDTEYMAGI YVDLTGFNYR IHSGFMQAKY AQRPFNTTQK LDIYTLGAEY SYESWQFMAE TEIDRLQANW YASVIYAFDD LSPYITYAES HQLRKSKGVT AGVRYDVTSS ISLNAEYQMI FSQEEGNRAQ FVTSPLVYGE SADVDLMTLS VSFVF
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