| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0270 |
|---|
| Symbol | |
|---|
| ID | 5660670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 303077 |
|---|
| End bp | 303916 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641234800 |
|---|
| Product | S-formylglutathione hydrolase |
|---|
| Protein accession | YP_001500133 |
|---|
| Protein GI | 157960099 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0627] Predicted esterase |
|---|
| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTG AAAATATCAG TGTAAATAAG AGCTTTGGTG GTTGGCATAA GCAGTACAGC
CATCAATCTA AAACACTTAA TTGCGCAATG CGATTTGCCA TTTATTTACC GCCTCAAGCG
TCAAATGGTA AAAAAGTGCC AGTGCTGTAT TGGTTGTCAG GTTTAACCTG CACCGATGAA
AACTTTATGC AAAAAGCCGG TGCTCAGCGT ATGGCTGCTG AGCTGGGTAT TGCGATTGTT
GCCCCTGATA CCAGCCCACG TGGTGACGAT GTTGCCGATG ACACGGGTTA CGACTTAGGT
AAGGGCGCAG GTTTCTATGT TAACGCTACC CAAGCTCCTT GGAACCGTCA TTATAGAATG
TACGATTATG TGGTTAATGA ATTGCCACAG CTGATTGAGT CTATGTTCCC GGTTAGTGAT
AAGCGCTCAA TAGCGGGCCA TTCTATGGGC GGCCACGGTG CACTCGTAAT TGCCATGCGT
AATCCACAGG CTTACCAGTC GGTGTCGGCA TTTAGCCCAA TTACGAACCC TGTTAACTGC
CCTTGGGGCA AGAAGGCGTT CACTGCTTAT TTGGGTCGTG ATACGACAAC TTGGGTTGAC
TACGATGCGA GCTTATTAAT GCGTCAAGCG ACTGAGTTTG TGCCAGCGCT AGTGGATCAA
GGTGAAGCTG ATGATTTTCT TATCGAACAG CTAAAGCCAG AGGTACTAGA GGCCGCAGCC
AAGATGAGTG GATATCCTTT AACGCTAAAT ATGCAAGAAG GCTTCGATCA TAGCTACTAC
TTTATCTCTA GCTTTATCGA AAACCACCTG CGTTTTCATG CTGAGCACTT AGTTAAGTAG
|
|---|
| Protein sequence | MTVENISVNK SFGGWHKQYS HQSKTLNCAM RFAIYLPPQA SNGKKVPVLY WLSGLTCTDE
NFMQKAGAQR MAAELGIAIV APDTSPRGDD VADDTGYDLG KGAGFYVNAT QAPWNRHYRM
YDYVVNELPQ LIESMFPVSD KRSIAGHSMG GHGALVIAMR NPQAYQSVSA FSPITNPVNC
PWGKKAFTAY LGRDTTTWVD YDASLLMRQA TEFVPALVDQ GEADDFLIEQ LKPEVLEAAA
KMSGYPLTLN MQEGFDHSYY FISSFIENHL RFHAEHLVK
|
|---|
| |