Gene Spea_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0267 
Symbol 
ID5660667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp300361 
End bp300918 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID641234797 
Productglutathione-dependent formaldehyde-activating enzyme 
Protein accessionYP_001500130 
Protein GI157960096 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02820] S-(hydroxymethyl)glutathione synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGT TAATTCACCC ACAAGTCGAC AACGGCATTC CTGCAACGGC AGCTAGTTTT 
GCTGGCGGAT CACTGCAATG TAAATGTGCA AACAATCCAG TTGAAGTCAC CATTGCAGCA 
CAAACTGCTC ATAACCATGT ATGTGGCTGC AGTAAATGTT GGAAGCCTGA AGGCGCGCTA 
TTTGCACAAA TTGCCGTAGT CGCAAAAGAT AAGGTTAGCG TAACCGCTAA TGCCGACAAG 
CTACACATCA TTGATGAGAG CGCTGCAATT CAACGTCACG CTTGTAAAGA GTGCGGCACT 
CATATGTATG GCCGCATCGA AAACACGGGG CACCCTTTCT ATGGCTTAGA CTTTGTGCAT 
ACAGAGCTAT CTAAGCAGCA AGGTTGGTCG GCGCCAGAGT TCGCTGCGTT TGTATCTTCA 
ATCATAGAGT CGGGTACTGC GCCTGAGGCT ATGGCAGATG TTCGCCAAAC TCTTAAGGAT 
CTCGGTTTAC CTCCTTATGA CTGTTTATCA CCAGCATTAA TGGATGCAAT CGCGACCCAT 
GTTGCGGCTA ACAAATAA
 
Protein sequence
MTTLIHPQVD NGIPATAASF AGGSLQCKCA NNPVEVTIAA QTAHNHVCGC SKCWKPEGAL 
FAQIAVVAKD KVSVTANADK LHIIDESAAI QRHACKECGT HMYGRIENTG HPFYGLDFVH 
TELSKQQGWS APEFAAFVSS IIESGTAPEA MADVRQTLKD LGLPPYDCLS PALMDAIATH 
VAANK