| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0264 |
|---|
| Symbol | |
|---|
| ID | 5660664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 296091 |
|---|
| End bp | 297299 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641234794 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001500127 |
|---|
| Protein GI | 157960093 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTA TTGTTATTGT TGGTGGTGGC GCTGCAGGTC TTGAAATCGC AAGCATGCTA
GGTCGCAGTG TAAATAGCCA AGATGAAGTT ATTCTGGTTG AAGGTGAAAC TCACCATTAT
TGGAAGCCAC GCTTTCATGA GATTGCTGCA GGTACTTTTG ACAGCGATCT CGACACAATC
TGCTATTTCA GCCATGGCGC TAATAATGGT TACATGCATT ACCAAGCTTG GATGACAGAC
GTCAATCGAG CGGCCAAGCA ACTCGTGGTT CGTAAGCCTA ACGGTGAAAC TGATACGCTA
GCTTACGATT ACTTAATCAT TGCCATCGGC GCAATTAGTA ATGACTTTGC TACCCAAGGT
GCGAAAGAGC ATTGCCTATT CTTAGATACA CCAGAGCAAG CCCGTGATAG CTGGCACCAA
ATCAGCTCAC TGCTGCGCTC AGGTCTGAGT CGCACCATTA ATATCGTTGG CGCTGGTGCC
ACCGGTTTAG AGCTCGCGGC TGAATTAGCT AAAGTCAGTG AAGAGTTAAG TCGCAATCCT
TATGCGGCAA AGCTTAATAT CAACTTGATT GAAGCTGCAG ACCGTGTATT ACCAAACGGC
CCAGTGAAAA TGTCTGAGCA AGCATTATTA AGGCTTGAGA AGTATCAAGT TAATGTCATG
CTCAATACCC GTATCGCCAG TGTTGAAGCG GATCGTATGA CCACCAGCGA CGGCCAAGTG
CTAAATGCCG ACGTGCAATT TTGGGCTGCA GGTATTAAGG CGCCGGATTG GCTAAAAGAG
ATTGGCGGTC TGCAGAGCAA TTCGCTAAAT CAATTAGTGG TTGAGCAAAC TCTGGCAACG
ACATTTGATT CATCGATTTT CGCTCTGGGT GATTGCGCCG CGATCCCACA AGCAGATGGC
AGCCAGGTAC CGCCAAAAGC ACAAGCAGCT AACCGTGCAG CCGTGCATTT AGCTAAAAAT
CTTGTTGCCC ATTTAAAGGG CAAGCCCCTC AAGCCTTTCG TCTACAACGA CGGTGGCATG
GTAGTCGCTA TCGGCCATAA CTTTGCCATT AGCACCATGA TGAACGATAG ATTGATCTTA
AAAGGCCGCC TAGTCCGTCG CCTCTACGAT ACGATTTTCC GTTTACATCA AAAAACTGTC
AGTGGTTACT TAGCCATGTC ACGTTTGATT ATCTTCAAGC GACTAAAGTG TCTATTTAAA
CCAGTCTAA
|
|---|
| Protein sequence | MSRIVIVGGG AAGLEIASML GRSVNSQDEV ILVEGETHHY WKPRFHEIAA GTFDSDLDTI
CYFSHGANNG YMHYQAWMTD VNRAAKQLVV RKPNGETDTL AYDYLIIAIG AISNDFATQG
AKEHCLFLDT PEQARDSWHQ ISSLLRSGLS RTINIVGAGA TGLELAAELA KVSEELSRNP
YAAKLNINLI EAADRVLPNG PVKMSEQALL RLEKYQVNVM LNTRIASVEA DRMTTSDGQV
LNADVQFWAA GIKAPDWLKE IGGLQSNSLN QLVVEQTLAT TFDSSIFALG DCAAIPQADG
SQVPPKAQAA NRAAVHLAKN LVAHLKGKPL KPFVYNDGGM VVAIGHNFAI STMMNDRLIL
KGRLVRRLYD TIFRLHQKTV SGYLAMSRLI IFKRLKCLFK PV
|
|---|
| |