| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0255 |
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| Symbol | |
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| ID | 5660655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 285322 |
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| End bp | 286578 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234785 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001500118 |
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| Protein GI | 157960084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAGCG ACTCGCAAAC ACAACCACTG ATTCAAATTA AGGATCTGTT TAAGGTCTTT
GGCAAAAAAC CAGAGCAGGT CATGCCAATG GTTAGGGATG GTCTTTCTAA GGACGAAATA
CTCGCAAAAA CGGGTCATAC AGTGGGCCTT AAAGCCATCA ATCTCGACAT TAGGAAAGGC
GAAATCTTTG TGATTATGGG GCTTTCCGGC TCTGGGAAAT CAACTTTAAT CCGTCATTTT
AATCGCCTCA TCGACCCGAC AGAGGGGCAA ATCCTGGTTG AGGGCTTGGA CGTGATGAAA
CTCAATACCA AGCAACTTGA GCAGTTCCGG CGCAGTAAAA TGGCCATGGT ATTCCAACGT
TTTGGCTTAA TGCCTCACCG AACTGTTCTA GAGAATGTCG GCTATGGCCT GAGTGTACAA
GGGGTCGACA AAACCACGAG GAACATCAAA GCCAAGCAAT GGCTTGAGAC TGTCGGTTTG
AGCGGCTATG AAGCGCAATA CCCCTCGCAA CTCTCAGGTG GACAACAGCA GCGCGTCGGC
CTCGCCAGAG CCCTGTGTAC CGATGCAGAA ATCTTGCTGA TGGATGAGGC CTTCTCAGCA
CTGGACCCGC TAATCCGCAG TGAAATGCAA GACCACTTGA TTGAGCTGCA AAAAGAATTG
CATAAAACGA TTATCTTCAT CACTCACGAC CTCGATGAAG CACTGCGAAT AGGCGATCGA
ATCGCTATCC TCAAAGATGG CAATCTCGTT CAAGTGGGTG AACCCGTCGA TATCTTACTT
AACCCGGCCG ACGACTACGT TGAAGCTTTT GTCAAAGACG TAAACCGCCC ACGAGCCCTA
ACCGTAGAAA CGGTGATGAA GCCACCCGCA TTCCGTCTCA CAGCAGATAC CATAGGTGAA
GCCCTCAAAC AGATGAAACG TATTCCAGCT AATTATGCCT ATTACGTTAC CGATGAAGGT
TTCCAGGGCG TGGTGTGCCA AGAAGCACTT GAAGATGCCG TTATGGCTGA TGAAGAAGCG
CTAATGGAAG ATTTTAAGGT AGAGGAGCTG ACCCCAATAT CACAAGATGC CCTGCTTGAA
AGCATTATTC CCGCAACGAT GGAGTCTGAT TATCCCCTGC CCGTTGTCGA TGCAGATGGT
GACTTACAAG GTGAACTATC CAGAACCCAT CTGGCAGATG TGCTATCTGA CTTTTACACC
GACGATGCTG ACAACACTGA CTTACAAAAA TCAAGCTTAA CCAATAAGGA TAAATGA
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| Protein sequence | MTSDSQTQPL IQIKDLFKVF GKKPEQVMPM VRDGLSKDEI LAKTGHTVGL KAINLDIRKG
EIFVIMGLSG SGKSTLIRHF NRLIDPTEGQ ILVEGLDVMK LNTKQLEQFR RSKMAMVFQR
FGLMPHRTVL ENVGYGLSVQ GVDKTTRNIK AKQWLETVGL SGYEAQYPSQ LSGGQQQRVG
LARALCTDAE ILLMDEAFSA LDPLIRSEMQ DHLIELQKEL HKTIIFITHD LDEALRIGDR
IAILKDGNLV QVGEPVDILL NPADDYVEAF VKDVNRPRAL TVETVMKPPA FRLTADTIGE
ALKQMKRIPA NYAYYVTDEG FQGVVCQEAL EDAVMADEEA LMEDFKVEEL TPISQDALLE
SIIPATMESD YPLPVVDADG DLQGELSRTH LADVLSDFYT DDADNTDLQK SSLTNKDK
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