| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0252 |
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| Symbol | |
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| ID | 5660652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 280449 |
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| End bp | 282323 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234781 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001500115 |
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| Protein GI | 157960081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.625916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAA GACTGAATAC AACAAAATTT ATCTCTATCG CAATTTTATC TGCGGTTTTG
TTCGGTTGCG GCACGACTTC TGCGCCGGTA AAGACTGAAA AGACTGAAGT TTCTTTATCG
TCGGTGACCA AGCCGTCATC ACAATACTTG GCATTAGCTG CCAACGAAAA AAATAAAGAA
ACTCAGGATA AGTATGTTTT ACTCGCCGCC CATGCCTTTA TCAATGAAGG TAATGCCAGC
GCCGCCGATA AAGCATTGAA GTCTATTGCG CAAGATATCA GTCAAAAGCC TGAGTTACTG
GCCGAGCATA TTTACCTTTC GGCTCGCGTG CTAGAGATGA CCTCTACCTA TGATCATGCT
CTGCAGGTGC TCAAATATCC AAGCAACTGG AAACTACCTA ACTGGCAATG GGTCAGCTAC
TACCAGTTCA AGGCGCACCT ATACCAGCAA GTTAACCAGC CAATCGATCA GGTTAGACAG
CTCAGTTTAC TCAGTCAGTA TCTACCAGCC GCCGAAGCCC ATGAGGTCAA TGACACTATT
TGGCGCTCTC TGCAGCAGAT TAACGAACAG ACACTACTTA GCTTTAGCGA CGATAGATCA
AACCCTATTT TTGCTGGCTG GGTTCAGCTT GCCTACATAG CTAAACACTA CGCCGTTGAC
CCTAACGACC TGGTGCGCCA CTTAGGCAGC TGGCAACAGC TCAATCCAAA TCACCCTGCT
GCGGCAAAAT TGCCAACAGA TTTAGAAAAG GCGCTCAATA CCCAGCCTTA CCAACCGAAA
AATATCGCTG TATTACTGCC ATTAACAGGT TCGCGCGCCG TTGTCGCTAA CACCGTAAAA
CAAGGTATTC TTGCTAACTA TATGGCAATG GGCGATGACG ATGTGACGCT TAACTTTTTC
GATACAGCGA CCGGAGCTCA AGCCGCTTAC CAGCAAGCTG TTGCTGCGGG TGCAGAGTTT
ATAATTGGTC CGTTACTGCA GTCTGAGGTC GAGCAGTTAC AAAGTATGAC GCCGACAGCT
GAAACAGTGT CTGCAACTAG CCCTTCAGCG CCTATCGCAC CGATTGCCAA TAAAACGATT
CCACAGTTGT TTTTAAACCA TATCGATAGC TTTACCGCAG ATCCTGATAA GTTCTTCTTT
GCTCTGTCTC CAACCGATGA GGCTATCGAT GCCGCTCAGC GCCTATACAA TGATGGTATT
AAGCAGCCTT TGTTACTAGT GAGCAACGAT GCTGTTGGCC ACCGCATGGC TGATAGCTTT
GATAACGCTT GGCAAAAACT AACCAATAAC GCTGCCGAAA TTCACTACTA TGACGGCGGC
GATAAGATGA AAGTCACGGT GCAAAAGGCT CTAGGGGTTA TCGACAGTAA GGAACGTATT
GCCCGCATCA AAGCGATTCT AACGCCTAAA ATTGAGGCCG ACTTCCGTTC ACGCCGTGAT
ATTGATGCGA TTTATATGAT CTCTGCCAGC CAAGATTTAG TGCTGCTTAA ACCCTTTATC
GATGTTAACT TCAGTGTATT CGCCGATCCG GTTCCGCTCT ACACCACCAG CCGTAGCCGA
GTAGAAGGCA ACAGCCGCAA TACCGCTGAA GAGCTAAATA ACCTCACCAT CAGCGATATA
CCTTGGTTAC TGACGCCGAA CACCGAAACT CAAATGGTTA ACGAGCTATG GCCAAGCTGG
AGCAATAGCC GCAAAAGACT ATTTATTATG GGCTATGATG CGCTGGATTT AGTGGGTAAA
CTGGCTCAGA TGCGCGCCTT ACCTGGCTAT CAGTTTTCAG GTCGTAGCGG AATGTTATCG
GTGCAACCTG ACGGCACATT AAACCGTCAA CTCAGCTGGG GTCGCTACCA GAGAGGTAAC
TTACGTCCGC TATAA
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| Protein sequence | MLKRLNTTKF ISIAILSAVL FGCGTTSAPV KTEKTEVSLS SVTKPSSQYL ALAANEKNKE
TQDKYVLLAA HAFINEGNAS AADKALKSIA QDISQKPELL AEHIYLSARV LEMTSTYDHA
LQVLKYPSNW KLPNWQWVSY YQFKAHLYQQ VNQPIDQVRQ LSLLSQYLPA AEAHEVNDTI
WRSLQQINEQ TLLSFSDDRS NPIFAGWVQL AYIAKHYAVD PNDLVRHLGS WQQLNPNHPA
AAKLPTDLEK ALNTQPYQPK NIAVLLPLTG SRAVVANTVK QGILANYMAM GDDDVTLNFF
DTATGAQAAY QQAVAAGAEF IIGPLLQSEV EQLQSMTPTA ETVSATSPSA PIAPIANKTI
PQLFLNHIDS FTADPDKFFF ALSPTDEAID AAQRLYNDGI KQPLLLVSND AVGHRMADSF
DNAWQKLTNN AAEIHYYDGG DKMKVTVQKA LGVIDSKERI ARIKAILTPK IEADFRSRRD
IDAIYMISAS QDLVLLKPFI DVNFSVFADP VPLYTTSRSR VEGNSRNTAE ELNNLTISDI
PWLLTPNTET QMVNELWPSW SNSRKRLFIM GYDALDLVGK LAQMRALPGY QFSGRSGMLS
VQPDGTLNRQ LSWGRYQRGN LRPL
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