Gene Spea_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0246 
Symbol 
ID5660646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp275753 
End bp276763 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content47% 
IMG OID641234775 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001500109 
Protein GI157960075 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCC CCCTAACGAA ACCAGTAGTT CTAAGCGGAG CGCAGCCATC GGGCGAGCTA 
ACCATCGGCA ACTATATGGG CGCGTTACGT CAGTGGGTTG CAATGCAAGA TAGTCATGAT 
TGCCTTTATT GCGTCGTTGA CCTGCATGCG ATTACTGTCA GACAAGACCC AGTAAAATTA 
CGTGAGGCGT GTCTTGATAC GTTAGCACTG TATTTAGCTT GTGGTGTTGA CCCTAAAAAG 
AGCACGGTAT TTATCCAATC TCAGGTGCCA CAGCACACTC AGCTTGGCTG GGCGCTAAAC 
TGTTACACCC AGATGGGTGA ACTAAACCGT ATGACGCAGT TTAAAGACAA GTCTCAGAAG 
CATGCTAACA ACATCAACGT CGGCCTATTT GGTTACCCTG TATTGATGGC TGCTGATATC 
TTGCTTTACC AAGCGAACGA AATCCCTGTG GGTCAAGATC AGAAGCAACA CTTAGAGCTG 
ACTCGTGATA TCGCGACACG CTTTAACAAT GCTTATGGCG AAACATTTGT CGTTCCAGAA 
CCATTTATTC CTGAGCATGG CGCTAAGGTG ATGTCACTAC AAGATCCGCT GAAGAAGATG 
TCTAAGTCTG ACGATAACCG TAATAACGTA ATCGGCCTGC TTGAAGATCC GAAAGCTATC 
ATGAAGAAGA TCAAAAAAGC GATGACAGAT GGCCAAGAGC CGCCAGTTGT ACGTTTCGAC 
GTTGCTGAAA AGCCAGGTGT ATCAAACCTA CTGAGTCTAA TGTCTGGCTG TACTGGTCAG 
TCAATTGCCA GTCTTGAAGC TGAGTTTGAA GGCAAGATGT ATGGTCATTT GAAAGTGGCA 
ACCGGTGAAG CCGTTGTCGG TATGCTTGAG CCGCTACAGC AGCGCTTTAA AGAATACCGT 
GCAGACCAAG ACTTCTTGAA TCAAGTGATG AGAGACGGAG CTGAAAAAGC ACAGGCTCGC 
GCTGAAGTCA CAATCAAGAA CGTCTACGAG AAGATCGGTC TTATCGTTTA A
 
Protein sequence
MTTPLTKPVV LSGAQPSGEL TIGNYMGALR QWVAMQDSHD CLYCVVDLHA ITVRQDPVKL 
REACLDTLAL YLACGVDPKK STVFIQSQVP QHTQLGWALN CYTQMGELNR MTQFKDKSQK 
HANNINVGLF GYPVLMAADI LLYQANEIPV GQDQKQHLEL TRDIATRFNN AYGETFVVPE 
PFIPEHGAKV MSLQDPLKKM SKSDDNRNNV IGLLEDPKAI MKKIKKAMTD GQEPPVVRFD 
VAEKPGVSNL LSLMSGCTGQ SIASLEAEFE GKMYGHLKVA TGEAVVGMLE PLQQRFKEYR 
ADQDFLNQVM RDGAEKAQAR AEVTIKNVYE KIGLIV