| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0245 |
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| Symbol | |
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| ID | 5660645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 275049 |
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| End bp | 275747 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234774 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001500108 |
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| Protein GI | 157960074 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTT TTAGTCAAAT CAACGCGGTA GCATTTGACT TAGACGGAAC GCTGATCGAT
AGCGTTCCGG ATCTAGCGGC TGCCACGCGC GCGACCCTAG AAGAGCTAAA CCTTCCACTT
TGCAGCGATG AACTAGTGCG AAGCTGGGTG GGTAATGGCG CTGAGATGCT AATGCGTAGA
GCATTATCTT TTGCCCTTGC TACTGAAGTG AGTGAAGAAA AGCTGCAAAA CACGATGCCG
CGCTTTATGC ATTTTTATAA GCAAAACCTG CAGCAACACA GCGTGCTATA TGCCGGTGTG
GAGTCGGTAT TATCCCAGCT CAAGCAAGCG GGCTATCGGA TGGCGATTGT CACCAACAAG
CCTTACGAAT TCACCATACC GCTACTTAAA GCATTTAATA TTCATGGTTA CTTTGACATA
GTGCTTGGCG GAGACTCATT AACAAAGATG AAACCCGATC CATTGCCACT GCAGCATATT
TTGCACGAGT GGCAGTTAGA ATCTGAGCAG TTGTTGATGG TTGGCGACTC AAAGAATGAC
ATATTAGCGG CAAAAGCGGC TAAGGTTGCT TCTGTGGGCT TGACCTATGG CTACAACTAC
GGTGAAGATA TCGGGCTAAG CGGCCCAGAT GCCGTATGTG AACAATTTAG TGAAATAACC
GCGCTACTTA ATCAGTGCGA TAAAGCAACG GAGCAATAA
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| Protein sequence | MNPFSQINAV AFDLDGTLID SVPDLAAATR ATLEELNLPL CSDELVRSWV GNGAEMLMRR
ALSFALATEV SEEKLQNTMP RFMHFYKQNL QQHSVLYAGV ESVLSQLKQA GYRMAIVTNK
PYEFTIPLLK AFNIHGYFDI VLGGDSLTKM KPDPLPLQHI LHEWQLESEQ LLMVGDSKND
ILAAKAAKVA SVGLTYGYNY GEDIGLSGPD AVCEQFSEIT ALLNQCDKAT EQ
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