Gene Spea_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0245 
Symbol 
ID5660645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp275049 
End bp275747 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID641234774 
Productphosphoglycolate phosphatase 
Protein accessionYP_001500108 
Protein GI157960074 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTT TTAGTCAAAT CAACGCGGTA GCATTTGACT TAGACGGAAC GCTGATCGAT 
AGCGTTCCGG ATCTAGCGGC TGCCACGCGC GCGACCCTAG AAGAGCTAAA CCTTCCACTT
TGCAGCGATG AACTAGTGCG AAGCTGGGTG GGTAATGGCG CTGAGATGCT AATGCGTAGA
GCATTATCTT TTGCCCTTGC TACTGAAGTG AGTGAAGAAA AGCTGCAAAA CACGATGCCG
CGCTTTATGC ATTTTTATAA GCAAAACCTG CAGCAACACA GCGTGCTATA TGCCGGTGTG
GAGTCGGTAT TATCCCAGCT CAAGCAAGCG GGCTATCGGA TGGCGATTGT CACCAACAAG
CCTTACGAAT TCACCATACC GCTACTTAAA GCATTTAATA TTCATGGTTA CTTTGACATA
GTGCTTGGCG GAGACTCATT AACAAAGATG AAACCCGATC CATTGCCACT GCAGCATATT
TTGCACGAGT GGCAGTTAGA ATCTGAGCAG TTGTTGATGG TTGGCGACTC AAAGAATGAC
ATATTAGCGG CAAAAGCGGC TAAGGTTGCT TCTGTGGGCT TGACCTATGG CTACAACTAC
GGTGAAGATA TCGGGCTAAG CGGCCCAGAT GCCGTATGTG AACAATTTAG TGAAATAACC
GCGCTACTTA ATCAGTGCGA TAAAGCAACG GAGCAATAA
 
Protein sequence
MNPFSQINAV AFDLDGTLID SVPDLAAATR ATLEELNLPL CSDELVRSWV GNGAEMLMRR 
ALSFALATEV SEEKLQNTMP RFMHFYKQNL QQHSVLYAGV ESVLSQLKQA GYRMAIVTNK
PYEFTIPLLK AFNIHGYFDI VLGGDSLTKM KPDPLPLQHI LHEWQLESEQ LLMVGDSKND
ILAAKAAKVA SVGLTYGYNY GEDIGLSGPD AVCEQFSEIT ALLNQCDKAT EQ