| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0234 |
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| Symbol | |
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| ID | 5660634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 265450 |
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| End bp | 266031 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641234763 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001500097 |
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| Protein GI | 157960063 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAACA TAAACTTATT ACCTTGGCGT GAAGAAGCGA GAGAAAAACA GAAGCGAGAT
TACACCGGGA TCTTAGCTCT AGTATTCTTA GTTTCTGGTT TAGTAGTTTA TTTATCGTTG
ATGACAATCG ATATGTTTAT CGATGATCAG AAAAGTCGTA ACGCTTATTT GCAATCTGAA
ATTCAGCTTC TTGAGTCGCA GATTTCTGAA ATCACTAAAA TCCGCACCCG TAAGAAAGAT
ATTGAAAGAC GAACCGAAAT TATTTTGGGC CTACAGCAAT CGAGAAACTT ACCGACTCAT
GTGTTAGACG AATTAGTACG TGTTGTTCCA CCTGGGATTT ATCTGTCTAG TATCGAAAAG
AAAGGCAGCA TGTTGTGGAT TGAGGGGCGT AGTGAGTCAA ATAACAATGT CGCAAATATG
ATGCGAAAAA TTGAAGCATC GGCTTGGTTG CAAGATCCTA ATATGCAATC GATCGTCGCC
CAAAATGAAG AATTAAGACA GTTACAGCGT TTCACATTAA GAGTGACAAT AGTTAATGGT
GAACTGCTAT CTGCAAGCAC AGTGCAGGGA GCGAGTAAAT GA
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| Protein sequence | MANINLLPWR EEAREKQKRD YTGILALVFL VSGLVVYLSL MTIDMFIDDQ KSRNAYLQSE
IQLLESQISE ITKIRTRKKD IERRTEIILG LQQSRNLPTH VLDELVRVVP PGIYLSSIEK
KGSMLWIEGR SESNNNVANM MRKIEASAWL QDPNMQSIVA QNEELRQLQR FTLRVTIVNG
ELLSASTVQG ASK
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