| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0232 |
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| Symbol | |
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| ID | 5660632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 261398 |
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| End bp | 263947 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234761 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001500095 |
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| Protein GI | 157960061 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.748115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTGGT TTAAACGACT TTTAATAGCT TTCTTTAGCC TTGGCTTGCT AGGCATCGGA
GCGATAGCTG CAGCTTATTT TTATGTGCTG CCAGATCTCC CTGATGTTAC GACGTTAAAG
ACAGTAAAAT TACAAACACC ACTTCGCATT TACAGTAGTG ATGGGAAGCT GATCTCTCAA
TTTGGTGAAA AGCGCCGTAT TCCACTTACG TTAGAAGAGG TGCCCAAGCC TCTACTACAA
GCTTTTATCG CTACCGAAGA TGCACGCTTC TACGAACACA AAGGTATCGA CCCAATCGGT
ATTTTACGTG CTGCATCTGT GATGCTAACC ACAGGCCAAA AGAAGCAAGG TGCGAGTACC
ATCACCATGC AGGTAGCACG TAACTTCTTT TTGACCCGCG ATAAGACCAT AATACGCAAA
GTAAAAGAGA TCTTTATCTC GATCCATATC GAGCAACTGC TCACCAAAGA TGAAATTCTA
GAACTGTATG TTAACCGTAT CTACCTAGGT CAGCGTGCCT ACGGGGTAGG CGCTGCCGCA
CAAGTGTATT ATGGAAAAGA AGTGAGCGAG CTGACTCTGC CGGAAATGGC GGTGATTGCA
GGCCTACCGA AAGCACCGTC AACGCTGAAC CCTATTACCT CAAAAGCACG TGCAAAAGCG
CGTCGCAATG TTGTGTTAAT GCGAATGAAC GAGGTTGGCT ATATCAATAA TGCTGAGTAT
CAAGCTGCAA TTGCTAGCCC GATTACCGCT AAATACCACG GCGCAGTCAT CGATCTGTAT
GCCCCCTATA TTTCTGAAAT GGCCCGTGAC TATTTAGTCG ATAAACTGGG CGAAGAAGAA
GCCTATACAG GCGGTTATGA CATCTATACC ACTGTCAGTT CTAAACTGCA GCTAGATGCT
CAAAAAGCAC TGCGTAACAA TGTGTACTCT TATGACGAAC GCCATGGTTA CCGTGGCAGA
GTAAAAGAGC TATGGACAAA AACAGCCCTC GAACCTGAAG AGATCACAGC CAGATTAAAG
CAAACTGGAG CATTCCAAGG CATGTTCCCT GCAGCTGTAT TATCTGTAAA TGAGCAGACC
GCGACAGTGA TGAATGCAAA AGGTGAAACT ATCGAGCTAC CTTGGGATGG CATCAAGTGG
GCGCGTAAGT TTATCACCAA CAAACGTCAA GGTAAGGCAC CTAAACTCGC CTCAGATGTA
TTGAAACCTG GCGAACAAGT GTGGATCCGC AACAATGGCA ACTTCTGGCA ACTAAGCCAA
GTGCCATTAG TTGCCAGCGC CCTAGTATCT CTAGATCCAC ATGACGGCGC GATTCGCACC
TTGGTGGGTG GCTTCAGCTT CTATACAAGC CAATATAACC GTGTAACTCA GGCTAAGCGC
CAGTTAGGTT CGAACATTAA ACCTTTCATC TATAGCGCGG CGTTAGAGAA AGGCTACACC
CTTGCCACCC TTATTAACAA CGCGCCAATT AATAAGCCTG ATACTAGACA AGGCACAGCT
TGGCGCCCTA AGAATTCACC GGATGTTTAT GGTGGTCCAA CTCGTCTACG TGTAGGCTTA
GCGCAATCGA TCAACGTGAT GTCTGTGAGA GCCATGCGCT ATGCTGGTCT GGATGCCACA
ATTGCCGAAC TGGTAAAGTT TGGTTTTGAC CCAGCCGACT TACCACGCAA TGAATCGATT
GCTTTAGGCT CACCATCGGT AACACCGCTG CAAGTCGTCA CCGCGTTCTC AGTGTTCGCT
AACGGTGGCT ACCTAGTCGA ACCGTACTTT ATCGAACGGG TAGAAACAGC AAGCGGTGAT
ATCGTAGAAC AAGCTAACCC AACACTAGCT TGTAAGCCTG TGGTGACAGA GCCAGTAATT
AATGATGATC CTTTTGCCGC TATGGCAAAT GAACTTCAAG CGAGCACGAC ACCTTTAGAA
AACTTATCCG CCGTTAATGC AATCCATCAA TGTGGCGACG CAGATTCGCG TTATGCACCA
CAGATTATTT CGGAGCAGAC TGCCTTCTTA GTCACCGAAT CACTAAAGAG TGTTATTTGG
GGTGGCGGCA ACTGGAGTAA AGGTACAGGT TGGAACGGTA CGGCATGGCG TGCTGCCCGA
GTGGTGAAAC GTCGCGATAT TGCTGGCAAG ACAGGTACAA CCAACGAGTC TCGTGATACT
TGGTTTAGTG GTTTTAACCC TAAACTTGCC ACCACAGTTT GGGTCGGTTT CGATGATCAC
AGCCAAGAGC TAGGTCGTAC TAGCTGGAAT GCTAACGGTG CCAAAGATCA GATATCTTTA
GCTGAAGCCG GTGCAAAAAC CGCAGGCCCT GGTTGGAATG AGTTTATGAA GGATGCCTTG
GCGGGTACAC CAGAAGTGCC AATGGCACCA CCAGAAGGTA TCGTATCGGC ACGAATCGAC
CTAGCGACTG GTAAGCTGAC CCGCAAAACC GATCACACCA GCAGGTTTGA GTACTTTATT
GCTGGCACTG AACCGACGGA ATACGTGACA GAGCAAGAAG ATAACAGCGA TATCTTTATC
GATGAGCCAG ATGAAGATCT ATTCCAGTAG
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| Protein sequence | MKWFKRLLIA FFSLGLLGIG AIAAAYFYVL PDLPDVTTLK TVKLQTPLRI YSSDGKLISQ
FGEKRRIPLT LEEVPKPLLQ AFIATEDARF YEHKGIDPIG ILRAASVMLT TGQKKQGAST
ITMQVARNFF LTRDKTIIRK VKEIFISIHI EQLLTKDEIL ELYVNRIYLG QRAYGVGAAA
QVYYGKEVSE LTLPEMAVIA GLPKAPSTLN PITSKARAKA RRNVVLMRMN EVGYINNAEY
QAAIASPITA KYHGAVIDLY APYISEMARD YLVDKLGEEE AYTGGYDIYT TVSSKLQLDA
QKALRNNVYS YDERHGYRGR VKELWTKTAL EPEEITARLK QTGAFQGMFP AAVLSVNEQT
ATVMNAKGET IELPWDGIKW ARKFITNKRQ GKAPKLASDV LKPGEQVWIR NNGNFWQLSQ
VPLVASALVS LDPHDGAIRT LVGGFSFYTS QYNRVTQAKR QLGSNIKPFI YSAALEKGYT
LATLINNAPI NKPDTRQGTA WRPKNSPDVY GGPTRLRVGL AQSINVMSVR AMRYAGLDAT
IAELVKFGFD PADLPRNESI ALGSPSVTPL QVVTAFSVFA NGGYLVEPYF IERVETASGD
IVEQANPTLA CKPVVTEPVI NDDPFAAMAN ELQASTTPLE NLSAVNAIHQ CGDADSRYAP
QIISEQTAFL VTESLKSVIW GGGNWSKGTG WNGTAWRAAR VVKRRDIAGK TGTTNESRDT
WFSGFNPKLA TTVWVGFDDH SQELGRTSWN ANGAKDQISL AEAGAKTAGP GWNEFMKDAL
AGTPEVPMAP PEGIVSARID LATGKLTRKT DHTSRFEYFI AGTEPTEYVT EQEDNSDIFI
DEPDEDLFQ
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