| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0230 |
|---|
| Symbol | |
|---|
| ID | 5660630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 258575 |
|---|
| End bp | 259813 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641234759 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001500093 |
|---|
| Protein GI | 157960059 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.633621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTG AAAATTCAGC AGTAAGTGAT CACTCAGGCG TTAACAAGGT TGTTCTGGCA
TATTCCGGTG GCTTAGACAC CTCGGCGATT ATTCCTTGGT TAAAAGAAAC TTATGATAAC
TGTGAAATTG TGGCCTTTTG TGCCGATGTT GGCCAAGGTG ATGCAGAGCT AGAAGGCTTG
TATGAAAAAG CCATCGCCTC TGGCGCATCT GAATGCTACA TCGTCGACTT AAAAGAGGAG
CTGGTGGCCG ATTATATCTA CCCAACGATT GCGACTGGTG CTATTTACGA AGGTACTTAC
CTGTTAGGTA CGTCGATGGC GAGGCCGATT ATTGCTAAGG CACAAGTTGA AGTTGCTCGT
AAAGTAGGCG CAGATGCGGT TTGTCACGGC TGTACTGGTA AAGGCAACGA TCAGGTTCGT
TTCGAAGGCT GTTTTGCTGC ATTAGCGCCT GATCTAAAAG TCATTGCGCC TTGGCGTGAG
TGGGAGATGG TGAGCCGTGA AGACCTGCTC GATTATCTTG CAGAGCGTAA TATTGCTACT
GCAGCGTCTG CGACCAAGAT CTATAGCCGT GATGCAAACG CTTGGCATAT TTCTCACGAA
GGCGGCGAGC TAGAAGATCC ATGGAATGAG CCATCGAAAG GGGTTTGGAC CATGACTGTC
GCCCCAGAGG ATGCGCCGAA TCAGCCTGAA TATGTGTCAC TAGAGCTTGA GCAAGGCAAG
ATCACTAAGG TAAACGGTGA GGCTTTATCA CCATATAAAG CCTTGATGGT ATTGAATGAA
GTAGCCGGTG CTCACGGTGT TGGCAGAATC GATATTACCG AAAACAGACT GGTTGGCATG
AAGTCTCGTG GTTGCTATGA AACGCCCGGT GGTACAGTGA TGTTCGCAGC ACTGCGCGCG
ATTGAAGAGT TAGTACTTGA TAAAACCAGC CGCGAGTGGC GTGAGCAAGT TGGCGCGCAG
ATGGCACACC TTGTCTATGA TGGTCGCTGG TTCACGCCAT TGTGTGAGTC TCTGCTAGGT
GCATCTAAGC CTTTAGCCGA CTTAGTGAAT GGTGAGGTAG TGGTCAAACT CTACAAGGGC
CAGGCCAGCG TAGTTAAGAA GCGTTCTCCT AATAGTCTGT ATTCTGAGGA GTTCGCGACC
TTTGGTGCCG ATGATGTTTA TAACCAAAAA GATGCGGAAG GCTTCATTCG TTTGTATTCG
CTTTCAAGCC GGATCAGAGC GTTACATAGT CAAAAGTAA
|
|---|
| Protein sequence | MSIENSAVSD HSGVNKVVLA YSGGLDTSAI IPWLKETYDN CEIVAFCADV GQGDAELEGL
YEKAIASGAS ECYIVDLKEE LVADYIYPTI ATGAIYEGTY LLGTSMARPI IAKAQVEVAR
KVGADAVCHG CTGKGNDQVR FEGCFAALAP DLKVIAPWRE WEMVSREDLL DYLAERNIAT
AASATKIYSR DANAWHISHE GGELEDPWNE PSKGVWTMTV APEDAPNQPE YVSLELEQGK
ITKVNGEALS PYKALMVLNE VAGAHGVGRI DITENRLVGM KSRGCYETPG GTVMFAALRA
IEELVLDKTS REWREQVGAQ MAHLVYDGRW FTPLCESLLG ASKPLADLVN GEVVVKLYKG
QASVVKKRSP NSLYSEEFAT FGADDVYNQK DAEGFIRLYS LSSRIRALHS QK
|
|---|
| |