| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0214 |
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| Symbol | |
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| ID | 5660614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 226489 |
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| End bp | 227175 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641234735 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001500077 |
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| Protein GI | 157960043 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.130113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG GCATCAGTTA TACCAAAGCA TTTAGCACGC TGTTAAAGCG TGATCTGCAA
ATAGCAGTGC GCCATCGCGG TGACATTTTT AACCCGCTAC TGTTTTTTGT CCTAGTGGTA
ACACTCTTCC CTCTAGGTAT TGGTCCAGAA CCACAAGTAT TAACTCGAGT TGCACCTGGT
ATTATTTGGG TCGCAGCACT TTTGGCATCA ATGTTATCGC TTGAACGTTT GTTTAAGGCA
GATTACGCCG ATGGTAGCCT TGAACAAATG CTATTAAGCC CTCAACCGCT ACCTCTAATG
GTGTTAGCCA AGGTGTTAGC GCATTGGATA TTGACAGGCG TGCCTTTGAT TTTGGTGGCA
CCATTACTAG CGGTGTTGTT GCATTTAGAA AGCAATAGCT ACGGCGCGTT GATTGCGACG
CTTGCGCTAG GGACTCCCGT GCTGAGCTTG CTCGGAGCCA TTGGTGTTGC ACTAACAGTT
GGATTACGTA AAGGTGGTGT GCTTTTAAGC CTGTTAATTT TACCTTTATA TATTCCAGTT
CTAATTTTTG CTACTAGCGC GATTGACGCT GCTGGTATGA ATTTACCTTA TGATGGTCAA
CTCGCTATTA TTGGCGCAAT GTTGGTCGGT TCATTAACGT TAGCACCATT TGCAATTGGT
GCATCCTTAC GAGTGAGTAC TAACTAA
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| Protein sequence | MKKGISYTKA FSTLLKRDLQ IAVRHRGDIF NPLLFFVLVV TLFPLGIGPE PQVLTRVAPG
IIWVAALLAS MLSLERLFKA DYADGSLEQM LLSPQPLPLM VLAKVLAHWI LTGVPLILVA
PLLAVLLHLE SNSYGALIAT LALGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV
LIFATSAIDA AGMNLPYDGQ LAIIGAMLVG SLTLAPFAIG ASLRVSTN
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