Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0213 |
Symbol | |
ID | 5660613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 225741 |
End bp | 226487 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641234734 |
Product | heme exporter protein CcmC |
Protein accession | YP_001500076 |
Protein GI | 157960042 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0846682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAT GGTTACATTC ATACGCGGAT CCTGAACGCG CCTACAAACT CTCAGGCACC CTACTACCTT GGTTTGCCAT GCTTGCAATA TCGATGATTG GTCTCGGTAC GGTTTGGGGC TTGGCTTTTG CTCCGACTGA TTATCAACAA GGTGACAGTT ACCGAATCAT CTTTATTCAT GTACCAGCCG CTTCTATGTC GATGGCAGCT TACATGGCCA TGGCGACATC TTCGTTTATC GGACTTGTAT GGCAAATTAA GTCTGCCGAC TGGGCTGCGG CGGCTATTGC ACCAATCGGT GCGGTCATTA CCTTTATTGC GCTTATTACA GGTGCAACAT GGGGCAAGCC TATGTGGGGT ACATGGTGGG TTTGGGATGC ACGCTTAACA TCTGAACTAG TACTGTTATT CTTATACCTA GGTGTTATCT CTCTTTATGC TTCATTTGAA GATAAAGTAT TGGCTGCTAG AGCCGCTGGC ATTTTAGCAA TCGTTGGTGT GATTAACATT CCAATCATCA AGTACTCTGT AGATTGGTGG AGCTCACTGC ACCAGCCATC TACAATCAAG ATCACTGAAG AATCTTCTAT GCCTTCAGAG ATGTTATATC CACTCCTAAT TAACATCATG GGATTCGGTA TAATGATTGG TGCGATAACA TTAGTGAGAT TTAGATCAGA AATTTTGGCA CGAAATGGCA TGCGTCCATG GGTTCGTGAA CTTGCTAAAG CAGAAGGGGT CAAATAA
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Protein sequence | MWKWLHSYAD PERAYKLSGT LLPWFAMLAI SMIGLGTVWG LAFAPTDYQQ GDSYRIIFIH VPAASMSMAA YMAMATSSFI GLVWQIKSAD WAAAAIAPIG AVITFIALIT GATWGKPMWG TWWVWDARLT SELVLLFLYL GVISLYASFE DKVLAARAAG ILAIVGVINI PIIKYSVDWW SSLHQPSTIK ITEESSMPSE MLYPLLINIM GFGIMIGAIT LVRFRSEILA RNGMRPWVRE LAKAEGVK
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