Gene Spea_0203 details

Gene Information

• Locus tag: Spea_0203
• Symbol: rplO
• ID: 5660604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 219142
• End bp: 219576
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641234725
• Product: 50S ribosomal protein L15
• Protein accession: YP_001500067
• Protein GI: 157960033
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000239677
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTAA ATACTCTATC ACCTGCTGCA GGTGCTAAAT CAGCAGCTAA GCGTGTAGGT 
CGCGGTATCG GTTCAGGCAC TGGTAAAACT TGTGGCCGTG GTCACAAAGG CCAGAAGTCT 
CGTTCTGGTG GCGGCGTTCG CGTCGGTTTC GAAGGTGGTC AAATGCCACT TAAGATTCGT 
TTGCCAAAGT TTGGTTTTAC CTCGCGTAAA GCGTTGGTAT CAGCCGAGAT TCGCATTAGC 
GAGTTGGCTA AAGTTAACGG TGATGTTATC GACCTAAATG CGCTGAAAGA TGCGAATCTA 
GTTACTCGCA ACATACAGTT TGCTAAAATC GTTCTTTCAG GTACCATTGA GCGCCCTGTG 
ACCGTTAAAG GTCTGAAGGT AACCCAAGGT GCACGTGCAG CTATTGAAGC TGCCGGTGGC 
AAGATCGAGG AATAA 

 

Protein sequence

MRLNTLSPAA GAKSAAKRVG RGIGSGTGKT CGRGHKGQKS RSGGGVRVGF EGGQMPLKIR 
LPKFGFTSRK ALVSAEIRIS ELAKVNGDVI DLNALKDANL VTRNIQFAKI VLSGTIERPV 
TVKGLKVTQG ARAAIEAAGG KIEE