| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0200 |
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| Symbol | rplR |
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| ID | 5660601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 218078 |
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| End bp | 218428 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234722 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001500064 |
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| Protein GI | 157960030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000288304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAACATCTCG CTTACGCCGC GCTCTACGTG CCCGTAAGAA GATCCAAGAG
CTGGGCGTTA ATCGTCTGGT TGTACATCGT ACACCACGTC ACACTTACGC TCAGGTCATT
AGCCCTGAAA ACGTAGTGTT GGCGGCAGCT TCTACTGCTG AAAAAGCAGT AACAGAGCAG
CTAAAGTACA CAGGTAACGT AGATGCAGCT AAAGTAGTGG GTAAAACCGT TGCTGAGCGC
GCTATCGAAA AAGGCGTAGC TGTAGTTGCA TTCGATCGTT CCGGCTTCAA GTATCACGGT
CGCGTTGCTG CATTAGCAGA CGCTGCACGT GAAGCTGGCC TCAAGTTCTA A
|
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| Protein sequence | MDKKTSRLRR ALRARKKIQE LGVNRLVVHR TPRHTYAQVI SPENVVLAAA STAEKAVTEQ
LKYTGNVDAA KVVGKTVAER AIEKGVAVVA FDRSGFKYHG RVAALADAAR EAGLKF
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